RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 Q6ZRM9 215 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 SLC35E3Q7Z769 313 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 CENPVQ7Z7K6 275 aaPredicted RBP9.63□□□□□ -0.87
VRK3-223ENST00000601341 PRR18Q8N4B5 295 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 TMEM217Q8N7C4 229 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 OR13A1Q8NGR1 328 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 PSMG3-AS1Q96PY0 264 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 GPHA2Q96T91 129 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 HSPB7Q9UBY9 170 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 UTP20O75691 2785 aaKnown RBP9.63□□□□□ -0.87
VRK3-223ENST00000601341 AKAP6Q13023 2319 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 TRGV10A0A0A0MS01 117 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 DVL1O14640 695 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 SPINT2O43291 252 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 SNRNP70P08621 437 aaKnown RBP9.63□□□□□ -0.87
VRK3-223ENST00000601341 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
VRK3-223ENST00000601341 EPHA1P21709 976 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 TAGLN2P37802 199 aaKnown RBP9.63□□□□□ -0.87
VRK3-223ENST00000601341 GPR6P46095 362 aaPredicted RBP9.63□□□□□ -0.87
VRK3-223ENST00000601341 MEF2CQ06413 473 aaPredicted RBP9.63□□□□□ -0.87
VRK3-223ENST00000601341 ZNF66Q6ZN08 573 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 FGFRL1Q8N441 504 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 ZNF525Q8N782 197 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 CLDND2Q8NHS1 167 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 P2RX4Q99571 388 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 RAB9BQ9NP90 201 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 SIRT7Q9NRC8 400 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 PSENENQ9NZ42 101 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 MIOXQ9UGB7 285 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 KCNS2Q9ULS6 477 aa9.63□□□□□ -0.87
VRK3-223ENST00000601341 TENM4Q6N022 2769 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 hADV38S2A0JD32 116 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 GPR37O15354 613 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 IGHV4-39P01824 125 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 HBZP02008 142 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 S100A8P05109 93 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 IL2RGP31785 369 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 UBE2KP61086 200 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 HTD2P86397 168 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 PNRC1Q12796 327 aaPredicted RBP9.62□□□□□ -0.87
VRK3-223ENST00000601341 HABP2Q14520 560 aaPredicted RBP9.62□□□□□ -0.87
VRK3-223ENST00000601341 SLC25A24Q6NUK1 477 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 TMEM14EPQ6UXP3 125 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 CD300LFQ8TDQ1 290 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 SFT2D1Q8WV19 159 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 NINJ1Q92982 152 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 CIB3Q96Q77 187 aaPredicted RBP9.62□□□□□ -0.87
VRK3-223ENST00000601341 DCTN5Q9BTE1 182 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 CTSZQ9UBR2 303 aa9.62□□□□□ -0.87
VRK3-223ENST00000601341 FAM90A9PA6NNJ1 464 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 SOX15O60248 233 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 RAB5AP20339 215 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 SSTR5P35346 364 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 RPL31P62899 125 aaKnown RBP9.61□□□□□ -0.87
VRK3-223ENST00000601341 TNFRSF9Q07011 255 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 ICAM4Q14773 271 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 ZNF787Q6DD87 383 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 THNSL2Q86YJ6 484 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 OR8B3Q8NGG8 313 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 OR1L1Q8NH94 360 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 UBALD1Q8TB05 177 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 CORO2AQ92828 525 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 NEIL1Q96FI4 390 aaPredicted RBP9.61□□□□□ -0.87
VRK3-223ENST00000601341 OR8B2Q96RD0 313 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 HSD17B10Q99714 261 aaKnown RBP9.61□□□□□ -0.87
VRK3-223ENST00000601341 RARRES2Q99969 163 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 NIPSNAP3BQ9BS92 247 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 TMEM242Q9NWH2 141 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 LINC00312Q9Y6C7 94 aa9.61□□□□□ -0.87
VRK3-223ENST00000601341 LOC102723971A0A1B0GUV8 181 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 C5orf52A6NGY3 159 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 ZNF98A6NK75 572 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 H3BQ15 152 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 C15orf65H3BRN8 121 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 UBE2CO00762 179 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 PDLIM4P50479 330 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 ATP5J2P56134 94 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 CCL20P78556 96 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 S100A12P80511 92 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 RUNX1Q01196 453 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 RFESDQ8TAC1 157 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 H1FXQ92522 213 aaKnown RBP9.6□□□□□ -0.87
VRK3-223ENST00000601341 YPEL4Q96NS1 127 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 TCEAL7Q9BRU2 100 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 WDR61Q9GZS3 305 aaKnown RBP9.6□□□□□ -0.87
VRK3-223ENST00000601341 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.6□□□□□ -0.87
VRK3-223ENST00000601341 METTL1Q9UBP6 276 aaKnown RBP9.6□□□□□ -0.87
VRK3-223ENST00000601341 TRBV23-1A0A0A0MS06 115 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 KBTBD11-OT1A0A1B0GTJ5 212 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 RAB29O14966 203 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 FCN3O75636 299 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 MBP02144 154 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 OR13C7P0DN81 318 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 CGB3P0DN86 165 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 CGB7P0DN87 165 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 TMEM41BQ5BJD5 291 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 ZNF841Q6ZN19 808 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 IQCF2Q8IXL9 164 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 LILRB2Q8N423 598 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms