RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 KCTD9Q7L273 389 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 REC114Q7Z4M0 266 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 LHFPL1Q86WI0 220 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 CLVS1Q8IUQ0 354 aaPredicted RBP6.81□□□□□ -1.32
SSBP4-208ENST00000600628 KLHL30-AS1Q8NEE0 82 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 LFNGQ8NES3 379 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 AP3S1Q92572 193 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 ARPC1AQ92747 370 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 RCC1LQ96I51 464 aaKnown RBP6.81□□□□□ -1.32
SSBP4-208ENST00000600628 TMEM68Q96MH6 324 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 GPHA2Q96T91 129 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 ZNF430Q9H8G1 570 aaPredicted RBP6.81□□□□□ -1.32
SSBP4-208ENST00000600628 GNB4Q9HAV0 340 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 PARP11Q9NR21 331 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 FAM212BQ9NTI7 297 aaPredicted RBP6.81□□□□□ -1.32
SSBP4-208ENST00000600628 MTFP1Q9UDX5 166 aa6.81□□□□□ -1.32
SSBP4-208ENST00000600628 HUWE1Q7Z6Z7 4374 aaKnown RBP6.8□□□□□ -1.32
SSBP4-208ENST00000600628 TRBV9A0A0B4J1U6 114 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 SMIM31A0A1B0GVY4 71 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 A6NHS1 94 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 RAMP3O60896 148 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 FCGR3BO75015 233 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 RBMXL2O75526 392 aaKnown RBP6.8□□□□□ -1.32
SSBP4-208ENST00000600628 CD74P04233 296 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 RCVRNP35243 200 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 HRH1P35367 487 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 UCP3P55916 312 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 SSBP1Q04837 148 aaKnown RBP6.8□□□□□ -1.32
SSBP4-208ENST00000600628 TMEM267Q0VDI3 215 aaPredicted RBP6.8□□□□□ -1.32
SSBP4-208ENST00000600628 ACTBL2Q562R1 376 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 LAX1Q8IWV1 398 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 OR4S2Q8NH73 311 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 TMEM167AQ8TBQ9 72 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 SECTM1Q8WVN6 248 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 ISOC1Q96CN7 298 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 RHOVQ96L33 236 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 FAM103A1Q9BTL3 118 aaKnown RBP6.8□□□□□ -1.32
SSBP4-208ENST00000600628 SLC5A7Q9GZV3 580 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 FXYD6Q9H0Q3 95 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 SLA2Q9H6Q3 261 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 EHFQ9NZC4 300 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 KLK11Q9UBX7 282 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 VSIG4Q9Y279 399 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 PRELID3BQ9Y3B1 194 aa6.8□□□□□ -1.32
SSBP4-208ENST00000600628 RBM7Q9Y580 266 aaKnown RBP6.8□□□□□ -1.32
SSBP4-208ENST00000600628 CGB1A6NKQ9 187 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 TEX22C9J3V5 150 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 E7EUB6 86 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 ZNF701M0R085 212 aaPredicted RBP6.79□□□□□ -1.32
SSBP4-208ENST00000600628 CTDSPLO15194 276 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 KBTBD11O94819 623 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 FCER2P06734 321 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 ZNF735P0CB33 412 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 TBPP20226 339 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 KIR2DS2P43631 304 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 GNB1P62873 340 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 VMA21Q3ZAQ7 101 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 ZNF585BQ52M93 769 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 IDO2Q6ZQW0 420 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 MMD2Q8IY49 270 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 ADAD2Q8NCV1 583 aaKnown RBP6.79□□□□□ -1.32
SSBP4-208ENST00000600628 OR52I2Q8NH67 350 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 SRSF12Q8WXF0 261 aaKnown RBP6.79□□□□□ -1.32
SSBP4-208ENST00000600628 MRGPRFQ96AM1 343 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 CLCC1Q96S66 551 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 ZNF2Q9BSG1 426 aaPredicted RBP6.79□□□□□ -1.32
SSBP4-208ENST00000600628 RSRP1Q9BUV0 290 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 PLEKHA2Q9HB19 425 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 IFT46Q9NQC8 304 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 AURKAIP1Q9NWT8 199 aaPredicted RBP6.79□□□□□ -1.32
SSBP4-208ENST00000600628 BET1LQ9NYM9 111 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 TAS2R8Q9NYW2 309 aa6.79□□□□□ -1.32
SSBP4-208ENST00000600628 MRPS7Q9Y2R9 242 aaKnown RBP6.79□□□□□ -1.32
SSBP4-208ENST00000600628 A0A1W2PN81 502 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 GABARAPH6UMI1 98 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 J3QRK9 145 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 PGLYRP1O75594 196 aaPredicted RBP6.78□□□□□ -1.32
SSBP4-208ENST00000600628 PMP2P02689 132 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 LGALS1P09382 135 aaKnown RBP6.78□□□□□ -1.32
SSBP4-208ENST00000600628 F2RP25116 425 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 PTBP1P26599 531 aaKnown RBP eCLIP6.78□□□□□ -1.32
SSBP4-208ENST00000600628 HLA-DMAP28067 261 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 MAS1LP35410 378 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 CHRNA7P36544 502 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 TAS2R31P59538 309 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 KRTAP10-11P60412 298 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 DGCR2P98153 550 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 CBX3Q13185 183 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 PLGLAQ15195 96 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 ECSCRQ19T08 205 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 TMEM65Q6PI78 240 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 UNQ5815/PRO19632Q6UWF5 114 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 SNX29P2Q8IUI4 249 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 SPAG16Q8N0X2 631 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 TTC9CQ8N5M4 171 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 POC5Q8NA72 575 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 OR5H2Q8NGV7 314 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 OR6F1Q8NGZ6 308 aa6.78□□□□□ -1.32
SSBP4-208ENST00000600628 VSTM2AQ8TAG5 236 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms