RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SSX7Q7RTT5 188 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 MRPL41Q8IXM3 137 aaKnown RBP9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 LFNGQ8NES3 379 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 OR4A16Q8NH70 328 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 RND1Q92730 232 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 PRRG2O14669 202 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 MBP02144 154 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 GUSBP1Q15486 140 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 PPP1R35Q8TAP8 253 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 H1FXQ92522 213 aaKnown RBP9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 CCL17Q92583 94 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 WNK2Q9Y3S1 2297 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 MAP1LC3B2A6NCE7 125 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 FAM157AC9JC47 383 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 CEACAM1P13688 526 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 UBE2G2P60604 165 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 KHDC3LQ587J8 217 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 C1orf162Q8NEQ5 155 aaPredicted RBP9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 LSM10Q969L4 123 aaKnown RBP9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 MISP3Q96FF7 219 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 MAP1LC3BQ9GZQ8 125 aa9.6□□□□□ -0.87
ARHGEF1-220ENST00000600274 TRAV3A0A0B4J244 114 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 LRRC30A6NM36 301 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF705FA8MVS1 300 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 CGAP01215 116 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF705DP0CH99 300 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF705BP0CI00 300 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 IRF2P14316 349 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 MYOD1P15172 320 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 KITLGP21583 273 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 REG1BP48304 166 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 C1orf87Q8N0U7 546 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 ARL6IP6Q8N6S5 226 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 RCC1LQ96I51 464 aaKnown RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 PACRGQ96M98 296 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 TMEM204Q9BSN7 226 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 MAP1AP78559 2803 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 SCGB1D1O95968 90 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 SOD3P08294 240 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 CDX1P47902 265 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 ERVK-16P61578 105 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 FFAR4Q5NUL3 377 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 CST9LP1Q5W188 147 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 GATAD1Q8WUU5 269 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 MBD3L4A6NDZ8 208 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 MBD3L3A6NE82 208 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 MBD3L5A6NJ08 208 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 GATCO43716 136 aaKnown RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BKO60814 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 CRYABP02511 175 aaKnown RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BJP06899 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 OR9G9P0C7N8 305 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 FAM87AP0C7U9 286 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BOP23527 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BBP33778 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BDP58876 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BCP62807 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 ICAM4Q14773 271 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST2H2BEQ16778 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 GCSAMLQ5JQS6 135 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 TIMM23BQ5SRD1 257 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 ZNF66Q6ZN08 573 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 ABHD12Q8N2K0 398 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 COMMD1Q8N668 190 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 MBD3L2Q8NHZ7 208 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 TAF15Q92804 592 aaKnown RBP eCLIP9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BHQ93079 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 OR5B12Q96R08 314 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 S1PR3Q99500 378 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BNQ99877 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 HIST1H2BMQ99879 126 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 SMIM7Q9BQ49 75 aa9.59□□□□□ -0.87
ARHGEF1-220ENST00000600274 LOC102724200A0A096LPH7 203 aaPredicted RBP9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 IGLV1-44P01699 117 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 ZNF25P17030 456 aaPredicted RBP9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 ZNF134P52741 427 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 PATZ1Q9HBE1 687 aaKnown RBP9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 HES4Q9HCC6 221 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 CALYQ9NYX4 217 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 KIAA1456Q9P272 454 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 SRRM5B3KS81 715 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 HBE1P02100 147 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 COL8A2P25067 703 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 BRWD1-AS2P59051 145 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 Q6ZS92 163 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 PLXNB1O43157 2135 aa9.58□□□□□ -0.88
ARHGEF1-220ENST00000600274 MGST3O14880 152 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 SRP19P09132 144 aaKnown RBP9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 MZT1Q08AG7 82 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 WDR61Q9GZS3 305 aaKnown RBP9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 IGHV2-70P01814 119 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 HOXA5P20719 270 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 GLRXP35754 106 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 ZNF726P1Q15940 193 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 HEPN1Q6WQI6 88 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 FAM90A1Q86YD7 464 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 CLDND2Q8NHS1 167 aa9.57□□□□□ -0.88
ARHGEF1-220ENST00000600274 LYPD6BQ8NI32 183 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms