RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 A1L4Q6 167 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 DNAL4O96015 105 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 MESP2Q0VG99 397 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 TMEM170BQ5T4T1 132 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 C1orf174Q8IYL3 243 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 ZCCHC14Q8WYQ9 949 aaKnown RBP10.12□□□□□ -0.79
SCN8A-208ENST00000599343 SRXN1Q9BYN0 137 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 S4R3C0 116 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 PRR33A8MZF0 331 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 GCHFRP30047 84 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 KCNS1Q96KK3 526 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 KCNE5Q9UJ90 142 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 TRAV30A0A087WSZ9 112 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 CRYBA2P53672 197 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 P2RY6Q15077 328 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 NUP37Q8NFH4 326 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 COPS9Q8WXC6 57 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 KIR2DL4Q99706 377 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 PAPPAQ13219 1627 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 LOC101059948A0A1B0GTJ6 334 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 LINC00305Q7Z4B0 112 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 C10orf126Q8N4M7 172 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 MRPL16Q9NX20 251 aaKnown RBP10.11□□□□□ -0.79
SCN8A-208ENST00000599343 MRPS16Q9Y3D3 137 aaKnown RBP10.11□□□□□ -0.79
SCN8A-208ENST00000599343 DMRT1Q9Y5R6 373 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 IGHV3-49A0A0A0MS15 119 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A26D6RGX4 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 WISP3O95389 354 aaPredicted RBP10.11□□□□□ -0.79
SCN8A-208ENST00000599343 COX6B1P14854 86 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 RSPO4Q2I0M5 234 aaPredicted RBP10.11□□□□□ -0.79
SCN8A-208ENST00000599343 PCSK4Q6UW60 755 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 KLF14Q8TD94 323 aaPredicted RBP10.11□□□□□ -0.79
SCN8A-208ENST00000599343 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 PKIBQ9C010 78 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 G6PC2Q9NQR9 355 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 TBL2Q9Y4P3 447 aaKnown RBP10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A10PA6NDY2 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A18PA6NE21 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A16PA6NEW6 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A20PA6NIJ5 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A8PA6NJQ4 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A7PA6NKC0 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A22PA8MWA6 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A12PA8MX19 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A5PA8MXJ8 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A23PA8MXZ1 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 GCM2O75603 506 aaPredicted RBP10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A15PP0C7V4 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A13PP0C7W8 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A14PP0C7W9 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 FAM90A24PP0C7X0 464 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 LINC00469Q8N7U9 141 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 Q96M66 194 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 CACNG7P62955 275 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 HBBP68871 147 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 SPRED2Q7Z698 418 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 PNKDQ8N490 385 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 PILRAQ9UKJ1 303 aa10.11□□□□□ -0.79
SCN8A-208ENST00000599343 NHLRC3Q5JS37 347 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 ZNF414Q96IQ9 312 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 PMCHL2Q9BQD1 86 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 SCN7AQ01118 1682 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 ZFC3H1O60293 1989 aaKnown RBP10.1□□□□□ -0.79
SCN8A-208ENST00000599343 NPPCP23582 126 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 RPL39P5Q59GN2 51 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 DRAM1Q8N682 238 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 POC1AQ8NBT0 407 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 IMMP2LQ96T52 175 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 NPDC1Q9NQX5 325 aaPredicted RBP10.1□□□□□ -0.79
SCN8A-208ENST00000599343 C2orf68Q2NKX9 166 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 FAM159AQ6UWV7 190 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 PIMREGQ9BSJ6 248 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 JPT1Q9UK76 154 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 TRBV9A0A0B4J1U6 114 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 DPRXA6NFQ7 191 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 B4E171 279 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 SLC17A3O00476 420 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 TSPAN7P41732 249 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.1□□□□□ -0.79
SCN8A-208ENST00000599343 CDCP2Q5VXM1 449 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 SMRP1Q8NCR6 262 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 TRPM6Q9BX84 2022 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 C4orf51C9J302 202 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 ICAM4Q14773 271 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 EEF1AKMT3Q96AZ1 226 aa10.1□□□□□ -0.79
SCN8A-208ENST00000599343 LOC105371242A0A075B767 164 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 C1QTNF9BB2RNN3 333 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 CTSBP07858 339 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 ACSF3Q4G176 576 aaPredicted RBP10.09□□□□□ -0.79
SCN8A-208ENST00000599343 REC114Q7Z4M0 266 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 MRPL32Q9BYC8 188 aaKnown RBP10.09□□□□□ -0.79
SCN8A-208ENST00000599343 TRPM3Q9HCF6 1732 aaPredicted RBP10.09□□□□□ -0.79
SCN8A-208ENST00000599343 AHRRA9YTQ3 701 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 OR11H12B2RN74 326 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 NPIPB11E5RHQ5 1161 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 IL6RP08887 468 aaPredicted RBP10.09□□□□□ -0.79
SCN8A-208ENST00000599343 OR11H1Q8NG94 326 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 OR11H2Q8NH07 326 aa10.09□□□□□ -0.79
SCN8A-208ENST00000599343 M0R381 172 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms