RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 OR2B11Q5JQS5 317 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 ANKRD13BQ86YJ7 626 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 OR5T1Q8NG75 326 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 MYOZ3Q8TDC0 251 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 GIMAP1Q8WWP7 306 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 DDB2Q92466 427 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 SPIN2AQ99865 258 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 SPIN2BQ9BPZ2 258 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 GNB4Q9HAV0 340 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 COA4Q9NYJ1 87 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 EHFQ9NZC4 300 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 LINC01619G3V211 115 aa11□□□□□ -0.65
LIG1-218ENST00000599322 NOL3O60936 208 aaKnown RBP11□□□□□ -0.65
LIG1-218ENST00000599322 CRYGBP07316 175 aa11□□□□□ -0.65
LIG1-218ENST00000599322 LGALS1P09382 135 aaKnown RBP11□□□□□ -0.65
LIG1-218ENST00000599322 EGR2P11161 476 aaPredicted RBP11□□□□□ -0.65
LIG1-218ENST00000599322 HOXD3P31249 432 aaPredicted RBP11□□□□□ -0.65
LIG1-218ENST00000599322 INSL3P51460 131 aa11□□□□□ -0.65
LIG1-218ENST00000599322 TSPAN5P62079 268 aa11□□□□□ -0.65
LIG1-218ENST00000599322 PRSS8Q16651 343 aa11□□□□□ -0.65
LIG1-218ENST00000599322 GPR107Q5VW38 600 aa11□□□□□ -0.65
LIG1-218ENST00000599322 OVCH2Q7RTZ1 564 aa11□□□□□ -0.65
LIG1-218ENST00000599322 SLC25A42Q86VD7 318 aa11□□□□□ -0.65
LIG1-218ENST00000599322 OR6F1Q8NGZ6 308 aa11□□□□□ -0.65
LIG1-218ENST00000599322 CD300LFQ8TDQ1 290 aa11□□□□□ -0.65
LIG1-218ENST00000599322 C15orf40Q8WUR7 153 aa11□□□□□ -0.65
LIG1-218ENST00000599322 SCPEP1Q9HB40 452 aa11□□□□□ -0.65
LIG1-218ENST00000599322 CCL28Q9NRJ3 127 aa11□□□□□ -0.65
LIG1-218ENST00000599322 TPSG1Q9NRR2 321 aa11□□□□□ -0.65
LIG1-218ENST00000599322 IGKV1D-13A0A0B4J2D9 117 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 DPPA5A6NC42 116 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 MSGN1A6NI15 193 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 I3L521 148 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 OR2A4O95047 310 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 HSPB1P04792 205 aaKnown RBP10.99□□□□□ -0.65
LIG1-218ENST00000599322 IGKV1-13P0DP09 117 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 PTHLHP12272 177 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 ZNF182P17025 639 aaPredicted RBP10.99□□□□□ -0.65
LIG1-218ENST00000599322 PJVKQ0ZLH3 352 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 C19orf54Q5BKX5 351 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 LPCAT3Q6P1A2 487 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 TMEM17Q86X19 198 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 CMTM1Q8IZ96 169 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 C5orf30Q96GV9 206 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 OR2A7Q96R45 310 aa10.99□□□□□ -0.65
LIG1-218ENST00000599322 RANGRFQ9HD47 186 aaPredicted RBP10.99□□□□□ -0.65
LIG1-218ENST00000599322 SRRM4A7MD48 611 aaKnown RBP10.98□□□□□ -0.65
LIG1-218ENST00000599322 OVOL1O14753 267 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 TNFSF12O43508 249 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 SOX15O60248 233 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 GABARAPO95166 117 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 IGHV3-11P01762 117 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 PMP2P02689 132 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 SAA1P0DJI8 122 aaPredicted RBP10.98□□□□□ -0.65
LIG1-218ENST00000599322 MAS1LP35410 378 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 EGFEM1PQ0D2K5 195 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 FHL3Q13643 280 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 TATDN3Q17R31 274 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 AADACL3Q5VUY0 350 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 IDO2Q6ZQW0 420 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 SNX29P2Q8IUI4 249 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 SPAG16Q8N0X2 631 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 CASTOR1Q8WTX7 329 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 SRSF12Q8WXF0 261 aaKnown RBP10.98□□□□□ -0.65
LIG1-218ENST00000599322 USMG5Q96IX5 58 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 ZNF2Q9BSG1 426 aaPredicted RBP10.98□□□□□ -0.65
LIG1-218ENST00000599322 ELOVL1Q9BW60 279 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 ADAM30Q9UKF2 790 aa10.98□□□□□ -0.65
LIG1-218ENST00000599322 SULT1C2O00338 296 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 HPGDSO60760 199 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 DHFRP00374 187 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 IFNA6P05013 189 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 EIF4EP06730 217 aaKnown RBP10.97□□□□□ -0.65
LIG1-218ENST00000599322 OR9G9P0C7N8 305 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 ZP3P21754 424 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 RCVRNP35243 200 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 ERVK-16P61578 105 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 RPL30P62888 115 aaKnown RBP10.97□□□□□ -0.65
LIG1-218ENST00000599322 DYRK1AQ13627 763 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 KIAA0141Q14154 515 aaPredicted RBP10.97□□□□□ -0.65
LIG1-218ENST00000599322 DHRS11Q6UWP2 260 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 SNAPC3Q92966 411 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 RHOVQ96L33 236 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 OR4C12Q96R67 309 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 ZNF430Q9H8G1 570 aaPredicted RBP10.97□□□□□ -0.65
LIG1-218ENST00000599322 HRASLSQ9HDD0 168 aa10.97□□□□□ -0.65
LIG1-218ENST00000599322 RGS5O15539 181 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 RBFOX2O43251 390 aaKnown RBP eCLIP10.96□□□□□ -0.65
LIG1-218ENST00000599322 HPRT1P00492 218 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 SMIM18P0DKX4 95 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 ELK1P19419 428 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 HLA-DMAP28067 261 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 ECI1P42126 302 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 RFX2P48378 723 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 FAM209BQ5JX69 171 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 ZNF429Q86V71 674 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 OR4A5Q8NH83 315 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 DCUN1D4Q92564 292 aa10.96□□□□□ -0.65
LIG1-218ENST00000599322 TINAGL1Q9GZM7 467 aaPredicted RBP10.96□□□□□ -0.65
LIG1-218ENST00000599322 CYB5BO43169 146 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms