RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 TMEM128Q5BJH2 165 aa13.15□□□□□ -0.3
CAPN12-208ENST00000597740 TCTEX1D1Q8N7M0 179 aa13.15□□□□□ -0.3
CAPN12-208ENST00000597740 OR51H1Q8NH63 302 aa13.15□□□□□ -0.3
CAPN12-208ENST00000597740 TCTEX1D2Q8WW35 142 aa13.15□□□□□ -0.3
CAPN12-208ENST00000597740 R3HDM4Q96D70 268 aa13.15□□□□□ -0.3
CAPN12-208ENST00000597740 NAA60Q9H7X0 242 aa13.15□□□□□ -0.3
CAPN12-208ENST00000597740 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
CAPN12-208ENST00000597740 IGHV3-72A0A0B4J1Y9 119 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 TEX13DA0A0J9YY54 714 aaPredicted RBP13.14□□□□□ -0.31
CAPN12-208ENST00000597740 INMT-MINDY4F8WBC2 141 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 BRS3P32247 399 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 KIR2DS2P43631 304 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 ARHGDIBP52566 201 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 SUPT4H1P63272 117 aaKnown RBP13.14□□□□□ -0.31
CAPN12-208ENST00000597740 LY6EQ16553 131 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 THNSL2Q86YJ6 484 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 SGPP2Q8IWX5 399 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 PIFOQ8TCI5 191 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 CHPT1Q8WUD6 406 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 CAPSLQ8WWF8 208 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 FAM212BQ9NTI7 297 aaPredicted RBP13.14□□□□□ -0.31
CAPN12-208ENST00000597740 SLC35D1Q9NTN3 355 aa13.14□□□□□ -0.31
CAPN12-208ENST00000597740 C3orf85A0A1B0GTC6 90 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 H0Y980 276 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 PEX14O75381 377 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 APOA2P02652 100 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 RRASP10301 218 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 RAB13P51153 203 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 RAB25P57735 213 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 PPP1R1AQ13522 171 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 EBI3Q14213 229 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 LRRC75BQ2VPJ9 315 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 ZNF585BQ52M93 769 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 SPAG16Q8N0X2 631 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 RBMXL1Q96E39 390 aaKnown RBP13.13□□□□□ -0.31
CAPN12-208ENST00000597740 GALNT14Q96FL9 552 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 TP53RKQ96S44 253 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 SSX3Q99909 188 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 LIN7CQ9NUP9 197 aaKnown RBP13.13□□□□□ -0.31
CAPN12-208ENST00000597740 KCNIP3Q9Y2W7 256 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 WASHC3Q9Y3C0 194 aa13.13□□□□□ -0.31
CAPN12-208ENST00000597740 K7EIL1 84 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 RBFOX2O43251 390 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPN12-208ENST00000597740 FCGR3BO75015 233 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 FBXO24O75426 580 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 B3GALNT1O75752 331 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 IL5P05113 134 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 OR4E1P0C645 316 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 RTL8BQ17RB0 113 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 TRIM16LQ309B1 348 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 SP6Q3SY56 376 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 TMEM177Q53S58 311 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 OR2B11Q5JQS5 317 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 PDPNQ86YL7 162 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 GLYATL2Q8WU03 294 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 WWC2-AS2Q96NR7 200 aa13.12□□□□□ -0.31
CAPN12-208ENST00000597740 COL7A1Q02388 2944 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 C9orf170A2RU37 121 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 H7C2Y5 167 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 RAMP3O60896 148 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 SFT2D2O95562 160 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 SNRNP70P08621 437 aaKnown RBP13.11□□□□□ -0.31
CAPN12-208ENST00000597740 OR5AC1P0C628 307 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 CD28P10747 220 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 CD24P25063 80 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 UCP1P25874 307 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 LPAR6P43657 344 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 TMEM187Q14656 261 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 LYG2Q86SG7 212 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 OR4F17Q8NGA8 305 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 OR4S2Q8NH73 311 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 TMEM222Q9H0R3 208 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
CAPN12-208ENST00000597740 DNAH3Q8TD57 4116 aa13.11□□□□□ -0.31
CAPN12-208ENST00000597740 PRAF2O60831 178 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 CRYZL1O95825 349 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 DHFRP00374 187 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 MOSP00540 346 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 IGKV1-16P04430 117 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 IGLL1P15814 213 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 DHRS2Q13268 280 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 Q8N6K4 173 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 OR2T10Q8NGZ9 312 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 FLYWCH2Q96CP2 140 aaKnown RBP13.1□□□□□ -0.31
CAPN12-208ENST00000597740 EAF1Q96JC9 268 aaPredicted RBP13.1□□□□□ -0.31
CAPN12-208ENST00000597740 RITA1Q96K30 269 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 RNF5Q99942 180 aa13.1□□□□□ -0.31
CAPN12-208ENST00000597740 CDS2O95674 445 aa13.09□□□□□ -0.31
CAPN12-208ENST00000597740 HPRT1P00492 218 aa13.09□□□□□ -0.31
CAPN12-208ENST00000597740 FAM106CPP0CH98 169 aa13.09□□□□□ -0.31
CAPN12-208ENST00000597740 ANXA3P12429 323 aa13.09□□□□□ -0.31
CAPN12-208ENST00000597740 RPA2P15927 270 aa13.09□□□□□ -0.31
CAPN12-208ENST00000597740 VAMP1P23763 118 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms