RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 MAPK3P27361 379 aaPredicted RBP7.48□□□□□ -1.21
TRIM28-210ENST00000597618 TAS2R43P59537 309 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 UNC119Q13432 240 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 MED21Q13503 144 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 TTC23Q5W5X9 447 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 CLEC19AQ6UXS0 136 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 MMD2Q8IY49 270 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 GVQW1Q8N7I0 195 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 OSR1Q8TAX0 266 aaPredicted RBP7.48□□□□□ -1.21
TRIM28-210ENST00000597618 EEF1AKMT3Q96AZ1 226 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 ADTRPQ96IZ2 230 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 C5orf66Q9H5L9 145 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 MAP6D1Q9H9H5 199 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 UBQLN2Q9UHD9 624 aa7.48□□□□□ -1.21
TRIM28-210ENST00000597618 DIMT1Q9UNQ2 313 aaKnown RBP7.48□□□□□ -1.21
TRIM28-210ENST00000597618 DPPA5A6NC42 116 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 NPIPB5A8MRT5 1133 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 TRDCB7Z8K6 153 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 XRCC3O43542 346 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 DHFRP00374 187 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 IGHV3-23P01764 117 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 MYOD1P15172 320 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 RPL35AP18077 110 aaKnown RBP7.47□□□□□ -1.21
TRIM28-210ENST00000597618 GALP22466 123 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 CDK10Q15131 360 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 ODF3L2Q3SX64 289 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 ZNF585BQ52M93 769 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 C10orf55Q5SWW7 151 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 CEACAM19Q7Z692 300 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 CBR4Q8N4T8 237 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 OR4A4PQ8NGN8 299 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 GALNT14Q96FL9 552 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 C6orf62Q9GZU0 229 aaPredicted RBP7.47□□□□□ -1.21
TRIM28-210ENST00000597618 MRPL27Q9P0M9 148 aaKnown RBP7.47□□□□□ -1.21
TRIM28-210ENST00000597618 UFC1Q9Y3C8 167 aa7.47□□□□□ -1.21
TRIM28-210ENST00000597618 A0A0A6YYD4 124 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 PNMA8CA0A1B0GUJ8 204 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 LOC100130705A0A1B0GUX0 176 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 TMEM14DPA8MWL7 114 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 TSPAN4O14817 238 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 WBP4O75554 376 aaKnown RBP7.46□□□□□ -1.22
TRIM28-210ENST00000597618 BPNT1O95861 308 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 SAA1P0DJI8 122 aaPredicted RBP7.46□□□□□ -1.22
TRIM28-210ENST00000597618 PSMB6P28072 239 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 FCGR2BP31994 310 aaPredicted RBP7.46□□□□□ -1.22
TRIM28-210ENST00000597618 ELLP55199 621 aaPredicted RBP7.46□□□□□ -1.22
TRIM28-210ENST00000597618 SMN1Q16637 294 aaKnown RBP7.46□□□□□ -1.22
TRIM28-210ENST00000597618 C1orf100Q5SVJ3 147 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 UNQ9165/PRO28630Q6UXU0 137 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 C5orf30Q96GV9 206 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 RARRES2Q99969 163 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 URM1Q9BTM9 101 aaKnown RBP7.46□□□□□ -1.22
TRIM28-210ENST00000597618 KCNK15Q9H427 330 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 CLEC2DQ9UHP7 191 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 HSF4Q9ULV5 492 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 APLNQ9ULZ1 77 aa7.46□□□□□ -1.22
TRIM28-210ENST00000597618 HERC1Q15751 4861 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 TRBV7-1A0A0A6YYK4 115 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 OR4C46A6NHA9 309 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 HMX3A6NHT5 357 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 PRSS29PA6NIE9 313 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 MPTX1A8MV57 137 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 IGLL5B9A064 214 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 TEX22C9J3V5 150 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 C11orf94C9JXX5 98 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 BET1O15155 118 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 SOCS1O15524 211 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 FABP7O15540 132 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 DIRAS3O95661 229 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 CD1AP06126 327 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 HIST1H1BP16401 226 aaKnown RBP7.45□□□□□ -1.22
TRIM28-210ENST00000597618 DUTP33316 252 aaKnown RBP7.45□□□□□ -1.22
TRIM28-210ENST00000597618 MFAP2P55001 183 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 QRFPP83859 136 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 LAMTOR1Q6IAA8 161 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 C19orf35Q6ZS72 473 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 ZNF485Q8NCK3 441 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 SETD9Q8NE22 299 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 OR10J5Q8NHC4 309 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 PYDC1Q8WXC3 89 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 CXorf58Q96LI9 332 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 FANCD2OSQ96PS1 177 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 FYTTD1Q96QD9 318 aaKnown RBP7.45□□□□□ -1.22
TRIM28-210ENST00000597618 CMSS1Q9BQ75 279 aaKnown RBP7.45□□□□□ -1.22
TRIM28-210ENST00000597618 CABLES2Q9BTV7 478 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 CSTL1Q9H114 145 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 LPAR5Q9H1C0 372 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 SLC2A9Q9NRM0 540 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 RBM7Q9Y580 266 aaKnown RBP7.45□□□□□ -1.22
TRIM28-210ENST00000597618 S4R3C0 116 aa7.45□□□□□ -1.22
TRIM28-210ENST00000597618 TRBV6-7A0A0A0MS04 114 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 CIB2O75838 187 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 S1PR2O95136 353 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 CLEC3BP05452 202 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 CRYGCP07315 174 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 CELP19835 753 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 MRPS15P82914 257 aaKnown RBP7.44□□□□□ -1.22
TRIM28-210ENST00000597618 KLK9Q2XQG4 91 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 RBM48Q5RL73 367 aaKnown RBP7.44□□□□□ -1.22
TRIM28-210ENST00000597618 FAM89BQ8N5H3 189 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms