RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 VKORC1L1Q8N0U8 176 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 TEX29Q8N6K0 151 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 ASB13Q8WXK3 278 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 ST6GAL2Q96JF0 529 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 AIFM2Q9BRQ8 373 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 MS4A7Q9GZW8 240 aaPredicted RBP11.79□□□□□ -0.52
VRK3-212ENST00000596814 FAM96BQ9Y3D0 163 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 MMP24Q9Y5R2 645 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 SVEP1Q4LDE5 3571 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 OTOGQ6ZRI0 2925 aa11.79□□□□□ -0.52
VRK3-212ENST00000596814 ACANP16112 2415 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 TLN2Q9Y4G6 2542 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 OR2A4O95047 310 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 IGKV1D-33P01593 117 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 IGKV1-33P01594 117 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 FBP1P09467 338 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 P0C879 139 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 BRS3P32247 399 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 RPS16P62249 146 aaKnown RBP11.78□□□□□ -0.52
VRK3-212ENST00000596814 POU2AF1Q16633 256 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 SPNS3Q6ZMD2 512 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 GPR146Q96CH1 333 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 RHOVQ96L33 236 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 C2orf50Q96LR7 162 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 OR2A7Q96R45 310 aa11.78□□□□□ -0.52
VRK3-212ENST00000596814 RANBP3Q9H6Z4 567 aaPredicted RBP11.78□□□□□ -0.52
VRK3-212ENST00000596814 SNRNP70P08621 437 aaKnown RBP11.77□□□□□ -0.52
VRK3-212ENST00000596814 RAP2BP61225 183 aa11.77□□□□□ -0.52
VRK3-212ENST00000596814 SRSF4Q08170 494 aaKnown RBP11.77□□□□□ -0.52
VRK3-212ENST00000596814 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.52
VRK3-212ENST00000596814 ZBTB8BQ8NAP8 495 aaPredicted RBP11.77□□□□□ -0.52
VRK3-212ENST00000596814 FYTTD1Q96QD9 318 aaKnown RBP11.77□□□□□ -0.52
VRK3-212ENST00000596814 NMES1Q9C002 83 aa11.77□□□□□ -0.52
VRK3-212ENST00000596814 TMEM140Q9NV12 185 aa11.77□□□□□ -0.52
VRK3-212ENST00000596814 CACNG5Q9UF02 275 aa11.77□□□□□ -0.52
VRK3-212ENST00000596814 A0A1B0GU03 582 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 SRRM4A7MD48 611 aaKnown RBP11.77□□□□□ -0.53
VRK3-212ENST00000596814 MOSP00540 346 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 SAA1P0DJI8 122 aaPredicted RBP11.77□□□□□ -0.53
VRK3-212ENST00000596814 SLC25A6P12236 298 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 LGALS7P47929 136 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 CYCSP99999 105 aaKnown RBP11.77□□□□□ -0.53
VRK3-212ENST00000596814 CD300CQ08708 224 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 HES1Q14469 280 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 SMCO1Q147U7 214 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 OR4A47Q6IF82 309 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 WDR89Q96FK6 387 aaPredicted RBP11.77□□□□□ -0.53
VRK3-212ENST00000596814 MEGF9Q9H1U4 602 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 YAE1D1Q9NRH1 226 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 GSKIPQ9P0R6 139 aa11.77□□□□□ -0.53
VRK3-212ENST00000596814 SOX21Q9Y651 276 aaPredicted RBP11.77□□□□□ -0.53
VRK3-212ENST00000596814 CELSR1Q9NYQ6 3014 aa11.76□□□□□ -0.53
VRK3-212ENST00000596814 FAM90A9PA6NNJ1 464 aa11.76□□□□□ -0.53
VRK3-212ENST00000596814 CD24P25063 80 aa11.76□□□□□ -0.53
VRK3-212ENST00000596814 VMA21Q3ZAQ7 101 aa11.76□□□□□ -0.53
VRK3-212ENST00000596814 TCTE3Q8IZS6 198 aa11.76□□□□□ -0.53
VRK3-212ENST00000596814 OR2T10Q8NGZ9 312 aa11.76□□□□□ -0.53
VRK3-212ENST00000596814 RITA1Q96K30 269 aa11.76□□□□□ -0.53
VRK3-212ENST00000596814 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
VRK3-212ENST00000596814 RNF5Q99942 180 aa11.76□□□□□ -0.53
VRK3-212ENST00000596814 IGLV2-23P01705 113 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 FAM106CPP0CH98 169 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 DYNLT3P51808 116 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 UBE2KP61086 200 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 EBI3Q14213 229 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 FAM120AOSQ5T036 256 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 Q6ZRM9 215 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 C9orf139Q6ZV77 190 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 OR4D5Q8NGN0 318 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 OR2T35Q8NGX2 323 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 OR1S1Q8NH92 325 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 VSTM2AQ8TAG5 236 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 EAF1Q96JC9 268 aaPredicted RBP11.75□□□□□ -0.53
VRK3-212ENST00000596814 COA4Q9NYJ1 87 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 BET1LQ9NYM9 111 aa11.75□□□□□ -0.53
VRK3-212ENST00000596814 SPDEFO95238 335 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 SCGB1D2O95969 90 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 TMEM11P17152 192 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 CNTFRP26992 372 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 HNF4GQ14541 408 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 LRRC75BQ2VPJ9 315 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 IL17RELQ6ZVW7 336 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 THNSL2Q86YJ6 484 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
VRK3-212ENST00000596814 BCL6BQ8N143 479 aaPredicted RBP11.74□□□□□ -0.53
VRK3-212ENST00000596814 PPP1R1CQ8WVI7 109 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 NSG2Q9Y328 171 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 SMLR1H3BR10 107 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 SLC25A17O43808 307 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 PITX3O75364 302 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 RBMXL2O75526 392 aaKnown RBP11.74□□□□□ -0.53
VRK3-212ENST00000596814 KBTBD11O94819 623 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 HNF1AP20823 631 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 OR2B8PP59922 312 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 IL15RAQ13261 267 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 MMDQ15546 238 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 DEFB112Q30KQ8 113 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 LRRC37A5PQ49AS3 106 aa11.74□□□□□ -0.53
VRK3-212ENST00000596814 FBLN7Q53RD9 439 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms