RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ADAD2Q8NCV1 583 aaKnown RBP10.01□□□□□ -0.81
LIG1-212ENST00000596549 ACOT12Q8WYK0 555 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 PHB2Q99623 299 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 AUNIPQ9H7T9 357 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 COA4Q9NYJ1 87 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 ADAM30Q9UKF2 790 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 MSGN1A6NI15 193 aa10□□□□□ -0.81
LIG1-212ENST00000596549 AADACP22760 399 aa10□□□□□ -0.81
LIG1-212ENST00000596549 ZNF45Q02386 682 aa10□□□□□ -0.81
LIG1-212ENST00000596549 OR13F1Q8NGS4 319 aa10□□□□□ -0.81
LIG1-212ENST00000596549 TCTEX1D2Q8WW35 142 aa10□□□□□ -0.81
LIG1-212ENST00000596549 TMEM68Q96MH6 324 aa10□□□□□ -0.81
LIG1-212ENST00000596549 TAS2R8Q9NYW2 309 aa10□□□□□ -0.81
LIG1-212ENST00000596549 MRPS7Q9Y2R9 242 aaKnown RBP10□□□□□ -0.81
LIG1-212ENST00000596549 C13orf42A0A1B0GVH6 325 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 A0A1B0GW64 132 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 ANKRD34BA5PLL1 514 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 MEIS3P1A6NDR6 274 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 AIREO43918 545 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 SLC22A5O76082 557 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 PPYP01298 95 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 PRH1P02810 166 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 OR9G9P0C7N8 305 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 GP9P14770 177 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 RPS19P39019 145 aaKnown RBP9.99□□□□□ -0.81
LIG1-212ENST00000596549 ARPC4P59998 168 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 LSM3P62310 102 aaKnown RBP9.99□□□□□ -0.81
LIG1-212ENST00000596549 TIMM50Q3ZCQ8 353 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 ZNF343Q6P1L6 599 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 C19orf35Q6ZS72 473 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 PUSL1Q8N0Z8 303 aaKnown RBP9.99□□□□□ -0.81
LIG1-212ENST00000596549 OR4S2Q8NH73 311 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 HSD17B10Q99714 261 aaKnown RBP9.99□□□□□ -0.81
LIG1-212ENST00000596549 RANGRFQ9HD47 186 aaPredicted RBP9.99□□□□□ -0.81
LIG1-212ENST00000596549 CCL28Q9NRJ3 127 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 PRELID3BQ9Y3B1 194 aa9.99□□□□□ -0.81
LIG1-212ENST00000596549 SORL1Q92673 2214 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 A0A0G2JLM5 398 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 TRIM64CA6NLI5 447 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 TEX22C9J3V5 150 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 E7EUB6 86 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 TNFSF12O43508 249 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 TMEM127O75204 238 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 KBTBD11O94819 623 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 TNFAIP8O95379 198 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 FCGR2CP31995 323 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 UBE2NLQ5JXB2 153 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 ZNF66Q6ZN08 573 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 MMD2Q8IY49 270 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 MFSD4AQ8N468 514 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 TSPAN14Q8NG11 270 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 OR6Q1Q8NGQ2 317 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 SECTM1Q8WVN6 248 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 ASCL2Q99929 193 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 DCUN1D5Q9BTE7 237 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 ANAPC10Q9UM13 185 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 SMAD5-AS1Q9Y6J3 95 aa9.98□□□□□ -0.81
LIG1-212ENST00000596549 A0A087WXM4 84 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 TRBV9A0A0B4J1U6 114 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 HMX3A6NHT5 357 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 MPPED1O15442 326 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 XRCC3O43542 346 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 CREBL2O60519 120 aaPredicted RBP9.97□□□□□ -0.81
LIG1-212ENST00000596549 IGLV1-51P01701 117 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 MYOD1P15172 320 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 ZP3P21754 424 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 TAS2R20P59543 309 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 KLF5Q13887 457 aaPredicted RBP9.97□□□□□ -0.81
LIG1-212ENST00000596549 MSMO1Q15800 293 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 IL34Q6ZMJ4 242 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 OR5AP2Q8NGF4 316 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 TMEM167AQ8TBQ9 72 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 WWC2-AS2Q96NR7 200 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 AKIP1Q9NQ31 210 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 DIABLOQ9NR28 239 aa9.97□□□□□ -0.81
LIG1-212ENST00000596549 KMT2CQ8NEZ4 4911 aaKnown RBP9.96□□□□□ -0.81
LIG1-212ENST00000596549 HUWE1Q7Z6Z7 4374 aaKnown RBP9.96□□□□□ -0.81
LIG1-212ENST00000596549 CGB1A6NKQ9 187 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 OR2A4O95047 310 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 IL6RP08887 468 aaPredicted RBP9.96□□□□□ -0.82
LIG1-212ENST00000596549 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 FXYD4P59646 89 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 NCS1P62166 190 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 RHOGP84095 191 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 EXOSC2Q13868 293 aaKnown RBP9.96□□□□□ -0.82
LIG1-212ENST00000596549 ZNF818PQ6ZRF7 136 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 SSX9Q7RTT3 188 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 TMEM17Q86X19 198 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 CROCCP3Q8IVE0 287 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 TTC9CQ8N5M4 171 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 SAMD12Q8N8I0 201 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 OR9G4Q8NGQ1 327 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 USMG5Q96IX5 58 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 OR2A7Q96R45 310 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 OR4C12Q96R67 309 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 SPIN2AQ99865 258 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 SPIN2BQ9BPZ2 258 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 RSRP1Q9BUV0 290 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 PEF1Q9UBV8 284 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms