RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 MSMPQ1L6U9 139 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 TIMM23BQ5SRD1 257 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 VHLLQ6RSH7 139 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 OR2Z1Q8NG97 314 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 OR2T10Q8NGZ9 312 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 BTF3L4Q96K17 158 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 SMIM7Q9BQ49 75 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 TMEM222Q9H0R3 208 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 DNAJC4Q9NNZ3 241 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 SH3BGRL2Q9UJC5 107 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 TLN1Q9Y490 2541 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 SSSCA1O60232 199 aa14.27□□□□□ -0.12
SHKBP1-205ENST00000594973 CDKN1BP46527 198 aa14.27□□□□□ -0.12
SHKBP1-205ENST00000594973 BPIFB3P59826 476 aa14.27□□□□□ -0.12
SHKBP1-205ENST00000594973 FAM27E3Q08E93 113 aa14.27□□□□□ -0.12
SHKBP1-205ENST00000594973 AARDQ4LEZ3 155 aa14.27□□□□□ -0.12
SHKBP1-205ENST00000594973 MBNL2Q5VZF2 373 aaKnown RBP14.27□□□□□ -0.12
SHKBP1-205ENST00000594973 WDR82Q6UXN9 313 aa14.27□□□□□ -0.12
SHKBP1-205ENST00000594973 CLEC18AA5D8T8 446 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 CST7O76096 145 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 KBTBD11O94819 623 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 IFNA5P01569 189 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 LCN2P80188 198 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 ZNF324BQ6AW86 544 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 SSX7Q7RTT5 188 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 ZNF695Q8IW36 515 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 CLEC18CQ8NCF0 446 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 SFXN3Q9BWM7 321 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 HES4Q9HCC6 221 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 AURKAIP1Q9NWT8 199 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 TAAR3PQ9P1P4 343 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 OR2W1Q9Y3N9 320 aa14.27□□□□□ -0.13
SHKBP1-205ENST00000594973 KALRNO60229 2985 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 IGF2RP11717 2491 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 KIAA2026Q5HYC2 2103 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 NECAP1Q8NC96 275 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 TMEM56Q96MV1 263 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 TUBG2Q9NRH3 451 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 TMEM56-RWDD3S4R434 201 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 DUXBA0A1W2PPF3 345 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 CEBPZOSA8MTT3 80 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 YPEL1O60688 119 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 CRYAAP02489 173 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 SELENOTP62341 195 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 RPL23P62829 140 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 ID3Q02535 119 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 TMEM183BQ1AE95 376 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 C22orf34Q6ZV56 151 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 FAM169BQ8N8A8 192 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 YPEL2Q96QA6 119 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 RPRMQ9NS64 109 aa14.26□□□□□ -0.13
SHKBP1-205ENST00000594973 CEACAM8P31997 349 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 RAB7AP51149 207 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 C11orf42Q8N5U0 333 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 Q8NA96 180 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 WFIKKN1Q96NZ8 548 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 SPOCK3Q9BQ16 436 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 RBKSQ9H477 322 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 ZZEF1O43149 2961 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 ICE1Q9Y2F5 2266 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 PGLYRP1O75594 196 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 AESQ08117 197 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 TBR1Q16650 682 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 LEMD1Q68G75 181 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 ACP7Q6ZNF0 438 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 MOB1BQ7L9L4 216 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 DOLPP1Q86YN1 238 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 TMEM217Q8N7C4 229 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 OR51H1Q8NH63 302 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 PSMG3Q9BT73 122 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 TMEM106BQ9NUM4 274 aa14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 RBM7Q9Y580 266 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-205ENST00000594973 ZGRF1Q86YA3 2104 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 TMEM250H0YL14 139 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 PRRG2O14669 202 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 KCNIP4Q6PIL6 250 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 PTPRQQ9UMZ3 2332 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 C20orf202A1L168 122 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 A8MXE2 369 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 K7EP13 123 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 KLF3P57682 345 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 PAFAH1B2P68402 229 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 CXorf66Q5JRM2 361 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 LCN15Q6UWW0 184 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 SELENOHQ8IZQ5 122 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 OR10V1Q8NGI7 309 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 SDSLQ96GA7 329 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 METRNQ9UJH8 293 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 SSUH2Q9Y2M2 353 aa14.24□□□□□ -0.13
SHKBP1-205ENST00000594973 SPTBN4Q9H254 2564 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 PCNX1Q96RV3 2341 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 TMEM50AO95807 157 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 UCP1P25874 307 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 CHRNB4P30926 498 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 TESK1Q15569 626 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 ZNF726P1Q15940 193 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 PRR30Q53SZ7 412 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 TPRX1Q8N7U7 411 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 RNASE8Q8TDE3 154 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 ORAOV1Q8WV07 137 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms