RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 DMRT1Q9Y5R6 373 aa10.84□□□□□ -0.67
DNMT1-228ENST00000592705 TMEM97Q5BJF2 176 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 FAM209BQ5JX69 171 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 PAXXQ9BUH6 204 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 C7orf69Q9H7B7 122 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 PPIAL4CA0A0B4J2A2 164 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 A0A1W2PPE3 182 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 PPIAL4GP0DN37 164 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 GTF2H5Q6ZYL4 71 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 NAGKQ9UJ70 344 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 DOCK4Q8N1I0 1966 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 ZNF735P0CB33 412 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 ARF6P62330 175 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 RABAC1Q9UI14 185 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 DIRC3C9JPN6 131 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 ZNHIT1O43257 154 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 LIPFP07098 398 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 LY6EQ16553 131 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 ATRAIDQ6UW56 229 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 C11orf42Q8N5U0 333 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 FADS6Q8N9I5 356 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 RNF126Q9BV68 326 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 PAM16Q9Y3D7 125 aa10.83□□□□□ -0.68
DNMT1-228ENST00000592705 OR2J3O76001 311 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 ACSF3Q4G176 576 aaPredicted RBP10.82□□□□□ -0.68
DNMT1-228ENST00000592705 PET117Q6UWS5 81 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 MRPL13Q9BYD1 178 aaKnown RBP10.82□□□□□ -0.68
DNMT1-228ENST00000592705 CACNA1IQ9P0X4 2223 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 A0A087WV48 116 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 F8VVB4 439 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 F8VWA3 439 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 KBTBD11O94819 623 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 ZNF826PQ6ZT77 177 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 AKIRIN1Q9H9L7 192 aaPredicted RBP10.82□□□□□ -0.68
DNMT1-228ENST00000592705 SPTBP11277 2137 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 NRN1LQ496H8 165 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 ZNF385CQ66K41 422 aaPredicted RBP10.82□□□□□ -0.68
DNMT1-228ENST00000592705 MRPL14Q6P1L8 145 aaKnown RBP10.82□□□□□ -0.68
DNMT1-228ENST00000592705 OR4C13Q8NGP0 309 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 SBF1O95248 1867 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 CSN3P07498 182 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 ZNF25P17030 456 aaPredicted RBP10.82□□□□□ -0.68
DNMT1-228ENST00000592705 LOXL3P58215 753 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 OR2D3Q8NGH3 330 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 HSPB8Q9UJY1 196 aa10.82□□□□□ -0.68
DNMT1-228ENST00000592705 NPIPB7O75200 414 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 TRGC1P0CF51 173 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 CD40P25942 277 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 WNT5AP41221 380 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 PTGDSP41222 190 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 ARTNQ5T4W7 220 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 C20orf204Q6ZNR8 217 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 BIVMQ86UB2 503 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 C5orf17Q8NAS9 161 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 RHOVQ96L33 236 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 GPR61Q9BZJ8 451 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 TMEM250H0YL14 139 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 K7ENP7 123 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 AGAP20933 346 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 CCL1P22362 96 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 UCP1P25874 307 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 GLRXP35754 106 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 CEBPDP49716 269 aaPredicted RBP10.81□□□□□ -0.68
DNMT1-228ENST00000592705 MIC13Q5XKP0 118 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 ZNF343Q6P1L6 599 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 PQLC2Q6ZP29 291 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 DRAM1Q8N682 238 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 FAM216AQ8WUB2 273 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 JPT1Q9UK76 154 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 ODAMA1E959 279 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 S1PR2O95136 353 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 PCSK4Q6UW60 755 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 TUBA4BQ9H853 241 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 CD99P14209 185 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 DDTP30046 118 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 SELENOTP62341 195 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 ST6GALNAC3Q8NDV1 305 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 OR4X2Q8NGF9 303 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 PARLQ9H300 379 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 DIDO1Q9BTC0 2240 aaKnown RBP10.81□□□□□ -0.68
DNMT1-228ENST00000592705 FGF16O43320 207 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 WDR25Q64LD2 544 aaPredicted RBP10.81□□□□□ -0.68
DNMT1-228ENST00000592705 TMEM140Q9NV12 185 aa10.81□□□□□ -0.68
DNMT1-228ENST00000592705 IGKV3-7A0A075B6H7 116 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 CEACAM18A8MTB9 384 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 CDKN1AP38936 164 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 KLF14Q8TD94 323 aaPredicted RBP10.8□□□□□ -0.68
DNMT1-228ENST00000592705 Q8WTZ3 238 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 HSPB9Q9BQS6 159 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 HSPE1P61604 102 aaKnown RBP10.8□□□□□ -0.68
DNMT1-228ENST00000592705 GAMTQ14353 236 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 IBA57Q5T440 356 aaKnown RBP10.8□□□□□ -0.68
DNMT1-228ENST00000592705 VWA1Q6PCB0 445 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 IMMP1LQ96LU5 166 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 GGACTQ9BVM4 153 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 HYPMO75409 117 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 MFAP2P55001 183 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 BSPH1Q075Z2 132 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms