RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 TGFBR3Q03167 851 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 Q56UQ5 140 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 SLC25A47Q6Q0C1 308 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 GMPPAQ96IJ6 420 aaPredicted RBP10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 TAAR3PQ9P1P4 343 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 MCTS1Q9ULC4 181 aaKnown RBP10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 COL4A2P08572 1712 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 AGFG2O95081 481 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 REG1AP05451 166 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 CA7P43166 264 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 C17orf82Q86X59 251 aaPredicted RBP10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 GJC3Q8NFK1 279 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 RAB1CQ92928 201 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 JMJD8Q96S16 334 aa10.35□□□□□ -0.75
SMARCA4-217ENST00000591595 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 FCN1O00602 326 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 SPRY1O43609 319 aaPredicted RBP10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 DHRS3O75911 302 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 CGAP01215 116 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 LINC00869P0C866 280 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 RNF183Q96D59 192 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 BOKQ9UMX3 212 aaPredicted RBP10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 ANKRD30BLA7E2S9 258 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 NTF3P20783 257 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 LTBRP36941 435 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 THBS3P49746 956 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 PSG4Q00888 419 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 CDCP2Q5VXM1 449 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 M0R135 149 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 SCRG1O75711 98 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 SERPINE2P07093 398 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 NXPH1P58417 271 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 TMEM187Q14656 261 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 COX19Q49B96 90 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 RHBDD2Q6NTF9 364 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 SLC25A34Q6PIV7 304 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 OR4F5Q8NH21 305 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 CT55Q8WUE5 264 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 GALMQ96C23 342 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 ZNF799Q96GE5 643 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 RCHY1Q96PM5 261 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 PNRC2Q9NPJ4 139 aaKnown RBP10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 SERTAD4Q9NUC0 356 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 UFC1Q9Y3C8 167 aa10.34□□□□□ -0.75
SMARCA4-217ENST00000591595 SAA2-SAA4A0A096LPE2 208 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 J3QR89 54 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 RHOBP62745 196 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 NRN1LQ496H8 165 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 SUMF1Q8NBK3 374 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 LYZL4Q96KX0 146 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 ZNF286AQ9HBT8 521 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 ANXA10Q9UJ72 324 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 H3BUT2 72 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 SSSCA1O60232 199 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 GAGE5Q13069 117 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 GAGE6Q13070 117 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 MRPL54Q6P161 138 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 ZNF841Q6ZN19 808 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 PP6455Q8WZ26 134 aa10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 WDR61Q9GZS3 305 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-217ENST00000591595 SRFP11831 508 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 PSMB3P49720 205 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 NFAM1Q8NET5 270 aaPredicted RBP10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 OR5P3Q8WZ94 311 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 C11orf1Q9H5F2 150 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 TRAPPC2LQ9UL33 140 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 TNRC6AQ8NDV7 1962 aaKnown RBP10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 LRP5LA4QPB2 252 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 SLC25A6P12236 298 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 ECI1P42126 302 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 PDCD1Q15116 288 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 SMRP1Q8NCR6 262 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 OR10X1Q8NGY0 326 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 C5orf30Q96GV9 206 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 TMEM204Q9BSN7 226 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 NCOA6Q14686 2063 aaPredicted RBP10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 TMEM189A5PLL7 270 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 MLNRO43193 412 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 CCL1P22362 96 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 NPY1RP25929 384 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 FABP6P51161 128 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 ADIPOQQ15848 244 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 ZNF324BQ6AW86 544 aaPredicted RBP10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 ZNF418Q8TF45 676 aaPredicted RBP10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 LHX4Q969G2 390 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 SPTSSAQ969W0 71 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 ULBP2Q9BZM5 246 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 NECAP2Q9NVZ3 263 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 CPAMD8Q8IZJ3 1885 aa10.32□□□□□ -0.76
SMARCA4-217ENST00000591595 FER1L5A0AVI2 2057 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 B5MCH6 92 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 C10orf142B7Z368 130 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 CCL7P80098 99 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 ZNF562Q6V9R5 426 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms