RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 OR56B2PQ8NGI1 322 aa12.77□□□□□ -0.37
CIRBP-228ENST00000590347 UCN2Q96RP3 112 aa12.77□□□□□ -0.37
CIRBP-228ENST00000590347 PHF7Q9BWX1 381 aaPredicted RBP12.77□□□□□ -0.37
CIRBP-228ENST00000590347 NPCDR1Q9BY65 106 aa12.77□□□□□ -0.37
CIRBP-228ENST00000590347 MRPS16Q9Y3D3 137 aaKnown RBP12.77□□□□□ -0.37
CIRBP-228ENST00000590347 A0A1W2PPV4 95 aa12.77□□□□□ -0.37
CIRBP-228ENST00000590347 G6PCP35575 357 aa12.77□□□□□ -0.37
CIRBP-228ENST00000590347 ALKBH4Q9NXW9 302 aa12.77□□□□□ -0.37
CIRBP-228ENST00000590347 FBLL1A6NHQ2 334 aaKnown RBP12.76□□□□□ -0.37
CIRBP-228ENST00000590347 SRFP11831 508 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 MUC15Q8N387 334 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 GJC3Q8NFK1 279 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 KCNE4Q8WWG9 221 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 SSBP4Q9BWG4 385 aaPredicted RBP12.76□□□□□ -0.37
CIRBP-228ENST00000590347 IL36BQ9NZH7 164 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 IL36GQ9NZH8 169 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 DOCK10Q96BY6 2186 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 PPIAL4DF5H284 164 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 MSR1P21757 451 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 RPL31P62899 125 aaKnown RBP12.76□□□□□ -0.37
CIRBP-228ENST00000590347 ZNF808Q8N4W9 903 aaPredicted RBP12.76□□□□□ -0.37
CIRBP-228ENST00000590347 GTSF1LQ9H1H1 148 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 PRDM6Q9NQX0 595 aa12.76□□□□□ -0.37
CIRBP-228ENST00000590347 M0R2Z0 102 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 BMPR1BO00238 502 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 CCL2P13500 99 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 LGALS4P56470 323 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 OR1D5P58170 312 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 SMAGPQ0VAQ4 97 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 OR2M7Q8NG81 312 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 SSMEM1Q8WWF3 244 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 NCOR1O75376 2440 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 RAMP3O60896 148 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 HSBP1O75506 76 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 ESDP10768 282 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 SMIM21Q3B7S5 101 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 OR1B1Q8NGR6 318 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 CHRDL1Q9BU40 450 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 YTHDF2Q9Y5A9 579 aaKnown RBP12.75□□□□□ -0.37
CIRBP-228ENST00000590347 OR7C2O60412 319 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 ZIC3O60481 467 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 NPY1RP25929 384 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 ARG2P78540 354 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 RPEL1Q2QD12 228 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 TMEM211Q6ICI0 200 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 SMIM12Q96EX1 92 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 OR8B2Q96RD0 313 aa12.75□□□□□ -0.37
CIRBP-228ENST00000590347 TRAV9-2A0A087WT02 112 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 IGHV3-9P01782 118 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 CTXN2P0C2S0 81 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 NBEAP1P0C6P0 100 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 Q0VG73 95 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 SPATA31B1PQ5VZV4 182 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 OR1F12Q8NHA8 337 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 WDR54Q9H977 334 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 B4GALT1P15291 398 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 FBLP22087 321 aaKnown RBP12.74□□□□□ -0.37
CIRBP-228ENST00000590347 GPM6AP51674 278 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 RPL8P62917 257 aaKnown RBP12.74□□□□□ -0.37
CIRBP-228ENST00000590347 SLAQ13239 276 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 ABHD14BQ96IU4 210 aa12.74□□□□□ -0.37
CIRBP-228ENST00000590347 TIAF1O95411 115 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 RHOGP84095 191 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 CNN3Q15417 329 aaKnown RBP12.73□□□□□ -0.37
CIRBP-228ENST00000590347 LRRC10Q5BKY1 277 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 BVES-AS1Q5T3Y7 98 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 MTCH1Q9NZJ7 389 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 IFI6P09912 130 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 S100GP29377 79 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 CCR5P51681 352 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 ZNF585BQ52M93 769 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 OR10P1Q8NGE3 313 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 OR2T6Q8NHC8 308 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 RAB37Q96AX2 223 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 LRP5LA4QPB2 252 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 M0R1X1 148 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 FOXH1O75593 365 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 IGLV3-1P01715 115 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 C9orf135Q5VTT2 229 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 FGFRL1Q8N441 504 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 FER1L6-AS1Q8NA97 138 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 SPSB1Q96BD6 273 aa12.73□□□□□ -0.37
CIRBP-228ENST00000590347 SVILO95425 2214 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 FREM1Q5H8C1 2179 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 ACTL6BO94805 426 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 TOX4O94842 621 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 CT55Q8WUE5 264 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 PLPPR2Q96GM1 343 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 OR2D2Q9H210 308 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 HILPDAQ9Y5L2 63 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 A0A1W2PQD3 144 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 GJE1A6NN92 205 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 C22orf46C9J442 243 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 PCSK4Q6UW60 755 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 SPTSSAQ969W0 71 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 TMEM186Q96B77 213 aa12.72□□□□□ -0.37
CIRBP-228ENST00000590347 GAGE10A6NGK3 116 aa12.71□□□□□ -0.37
CIRBP-228ENST00000590347 PDE6DO43924 150 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms