RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ZNF430Q9H8G1 570 aaPredicted RBP14.12□□□□□ -0.15
DDX39A-212ENST00000590260 AURKAIP1Q9NWT8 199 aaPredicted RBP14.12□□□□□ -0.15
DDX39A-212ENST00000590260 NOTCH3Q9UM47 2321 aa14.12□□□□□ -0.15
DDX39A-212ENST00000590260 CTDSP2O14595 271 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 RBMXL2O75526 392 aaKnown RBP14.11□□□□□ -0.15
DDX39A-212ENST00000590260 HLA-DMAP28067 261 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 C10orf55Q5SWW7 151 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 TMEM65Q6PI78 240 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 TMEM17Q86X19 198 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 PUSL1Q8N0Z8 303 aaKnown RBP14.11□□□□□ -0.15
DDX39A-212ENST00000590260 DYNC2LI1Q8TCX1 351 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 MOB3AQ96BX8 217 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 MS4A10Q96PG2 267 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 ABHD1Q96SE0 405 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 ADAM30Q9UKF2 790 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 VSIG4Q9Y279 399 aa14.11□□□□□ -0.15
DDX39A-212ENST00000590260 A0A1B0GW64 132 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 E7EUB6 86 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 APELAP0DMC3 54 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 HOXD3P31249 432 aaPredicted RBP14.1□□□□□ -0.15
DDX39A-212ENST00000590260 HRH1P35367 487 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 DEFA5Q01523 94 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 EGFEM1PQ0D2K5 195 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 TMEM267Q0VDI3 215 aaPredicted RBP14.1□□□□□ -0.15
DDX39A-212ENST00000590260 CBX3Q13185 183 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 VMA21Q3ZAQ7 101 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 MZT2AQ6P582 158 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 LAX1Q8IWV1 398 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 OR5T1Q8NG75 326 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 OR11H1Q8NG94 326 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 OR5M8Q8NGP6 311 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 ZNF2Q9BSG1 426 aaPredicted RBP14.1□□□□□ -0.15
DDX39A-212ENST00000590260 SCPEP1Q9HB40 452 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 PRELID3BQ9Y3B1 194 aa14.1□□□□□ -0.15
DDX39A-212ENST00000590260 FAM25AB3EWG3 89 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 FAM25CB3EWG5 89 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 FAM25GB3EWG6 89 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 SULT1C2O00338 296 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 CNIH1O95406 144 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 RPL5P46777 297 aaKnown RBP14.09□□□□□ -0.15
DDX39A-212ENST00000590260 TMBIM6P55061 237 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 TNXAQ16473 311 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 RNASE12Q5GAN4 147 aaKnown RBP14.09□□□□□ -0.15
DDX39A-212ENST00000590260 ZBTB34Q8NCN2 500 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 OR5H2Q8NGV7 314 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 OR4S2Q8NH73 311 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 RAB2BQ8WUD1 216 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 SRSF12Q8WXF0 261 aaKnown RBP14.09□□□□□ -0.15
DDX39A-212ENST00000590260 AP3S1Q92572 193 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 RHOVQ96L33 236 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 EXTL2Q9UBQ6 330 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 TNCP24821 2201 aa14.09□□□□□ -0.15
DDX39A-212ENST00000590260 SMIM31A0A1B0GVY4 71 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 MSGN1A6NI15 193 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 IGHV3-11P01762 117 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 MYOD1P15172 320 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 TAS2R46P59540 309 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 POC5Q8NA72 575 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 OR1N2Q8NGR9 330 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 OR52I2Q8NH67 350 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 DCUN1D5Q9BTE7 237 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 KLK11Q9UBX7 282 aa14.08□□□□□ -0.16
DDX39A-212ENST00000590260 IGHV4OR15-8A0A075B7B6 117 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 A0A087WW49 117 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 CGB1A6NKQ9 187 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 TEX22C9J3V5 150 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 H3BMQ9 156 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 DUS4LO95620 317 aaKnown RBP14.07□□□□□ -0.16
DDX39A-212ENST00000590260 IL6RP08887 468 aaPredicted RBP14.07□□□□□ -0.16
DDX39A-212ENST00000590260 LGALS1P09382 135 aaKnown RBP14.07□□□□□ -0.16
DDX39A-212ENST00000590260 RAB25P57735 213 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 TPPP2P59282 170 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 PYHIN1Q6K0P9 492 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 SPAG16Q8N0X2 631 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 TMEM167AQ8TBQ9 72 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 ISOC1Q96CN7 298 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 CEPT1Q9Y6K0 416 aa14.07□□□□□ -0.16
DDX39A-212ENST00000590260 TRAV3A0A0B4J244 114 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 K7EIL1 84 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 M0QYG6 137 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 RBFOX2O43251 390 aaKnown RBP eCLIP14.06□□□□□ -0.165e-7■■■□□ 18.4
DDX39A-212ENST00000590260 KBTBD11O94819 623 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 BRI3O95415 125 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 TRGV3P03979 118 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 RCVRNP35243 200 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 HERV-K104P61576 105 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 ZNF45Q02386 682 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 ZNF616Q08AN1 781 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 AADACL3Q5VUY0 350 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 C19orf35Q6ZS72 473 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 SSX9Q7RTT3 188 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 ADAD2Q8NCV1 583 aaKnown RBP14.06□□□□□ -0.16
DDX39A-212ENST00000590260 OR51H1Q8NH63 302 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 BCL7BQ9BQE9 202 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 SLIRPQ9GZT3 109 aaKnown RBP14.06□□□□□ -0.16
DDX39A-212ENST00000590260 SLA2Q9H6Q3 261 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 SCOCQ9UIL1 159 aa14.06□□□□□ -0.16
DDX39A-212ENST00000590260 TGP01266 2768 aa14.05□□□□□ -0.16
DDX39A-212ENST00000590260 WI2-2373I1.2A0A1W2PRP0 233 aa14.05□□□□□ -0.16
DDX39A-212ENST00000590260 PGLYRP1O75594 196 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms