RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, human

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB2-205	ENST00000590000	ELK1	P19419	428 aa		10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	AADAC	P22760	399 aa		10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	INSL3	P51460	131 aa		10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	RPL30	P62888	115 aa	Known RBP	10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	PJVK	Q0ZLH3	352 aa		10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	ECSCR	Q19T08	205 aa		10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	SNAPC3	Q92966	411 aa		10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	CCL28	Q9NRJ3	127 aa		10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	RBMX2	Q9Y388	322 aa	Known RBP	10.86	□□□□□ -0.67
SAFB2-205	ENST00000590000	SMIM31	A0A1B0GVY4	71 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	FAM25A	B3EWG3	89 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	FAM25C	B3EWG5	89 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	FAM25G	B3EWG6	89 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	ARPC1B	O15143	372 aa	Known RBP	10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	SHOX	O15266	292 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	SAP30	O75446	220 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	CA2	P00918	260 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	PMP2	P02689	132 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	ZNF182	P17025	639 aa	Predicted RBP	10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	PRSS3	P35030	304 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	CBX5	P45973	191 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	LGALS7	P47929	136 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	RFX2	P48378	723 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	SPCS2	Q15005	226 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	OR2B11	Q5JQS5	317 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	ACSM6	Q6P461	480 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	ZNF429	Q86V71	674 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	PPP1R27	Q86WC6	154 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	SNX29P2	Q8IUI4	249 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	ZNF645	Q8N7E2	425 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	SECTM1	Q8WVN6	248 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	DDB2	Q92466	427 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	DCUN1D5	Q9BTE7	237 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	IFT46	Q9NQC8	304 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	C19orf73	Q9NVV2	129 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	NUBP2	Q9Y5Y2	271 aa		10.85	□□□□□ -0.67
SAFB2-205	ENST00000590000	FCGR3B	O75015	233 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	CRYZL1	O95825	349 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	APOA1	P02647	267 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	CRYGB	P07316	175 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	FXYD4	P59646	89 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	FXYD3	Q14802	87 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	CDK10	Q15131	360 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	RTL8B	Q17RB0	113 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	TMEM177	Q53S58	311 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	MZT2A	Q6P582	158 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	TMEM65	Q6PI78	240 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	ZNF562	Q6V9R5	426 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	LYSMD2	Q8IV50	215 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	LFNG	Q8NES3	379 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	OR5AP2	Q8NGF4	316 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	ACOT12	Q8WYK0	555 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	ADTRP	Q96IZ2	230 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000	HARBI1	Q96MB7	349 aa		10.84	□□□□□ -0.67
SAFB2-205	ENST00000590000		A0A1W2PN81	502 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	TNFSF12	O43508	249 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	CNIH1	O95406	144 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	PPY	P01298	95 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	IGHV4-30-4	P0DP06	118 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	RRAS	P10301	218 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	HLA-DMA	P28067	261 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	CHRNA7	P36544	502 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	TAGLN	Q01995	201 aa	Known RBP	10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	CBX3	Q13185	183 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	RNASE12	Q5GAN4	147 aa	Known RBP	10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	UNQ5815/PRO19632	Q6UWF5	114 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	MFSD4A	Q8N468	514 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	CMTM3	Q96MX0	182 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	SLC5A7	Q9GZV3	580 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	TAS2R8	Q9NYW2	309 aa		10.83	□□□□□ -0.68
SAFB2-205	ENST00000590000	LINC01619	G3V211	115 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	SLC22A5	O76082	557 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	IGHV3-11	P01762	117 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	RPL5	P46777	297 aa	Known RBP	10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	CRIP2	P52943	208 aa	Predicted RBP	10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	BRWD1-AS2	P59051	145 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	MRGPRG-AS1	Q2M3A8	158 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	IDO2	Q6ZQW0	420 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	OR5T1	Q8NG75	326 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	GRPEL2	Q8TAA5	225 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	GPX8	Q8TED1	209 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	TCTEX1D2	Q8WW35	142 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	GIMAP1	Q8WWP7	306 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	MS4A10	Q96PG2	267 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	EHF	Q9NZC4	300 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	ANAPC10	Q9UM13	185 aa		10.82	□□□□□ -0.68
SAFB2-205	ENST00000590000	CTDSP2	O14595	271 aa		10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	SPDEF	O95238	335 aa		10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	LGALS1	P09382	135 aa	Known RBP	10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	APELA	P0DMC3	54 aa		10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	NAT1	P18440	290 aa		10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	SSBP2	P81877	361 aa	Predicted RBP	10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	DHRS11	Q6UWP2	260 aa		10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	KCTD9	Q7L273	389 aa		10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	VKORC1L1	Q8N0U8	176 aa		10.81	□□□□□ -0.68
SAFB2-205	ENST00000590000	OR5H2	Q8NGV7	314 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms