RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 DBX1A6NMT0 343 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 TMEM11P17152 192 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 AANATQ16613 207 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 THNSL2Q86YJ6 484 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 SELENOHQ8IZQ5 122 aaKnown RBP18.16■□□□□ 0.5
ACTN4-210ENST00000588618 SLC35G3Q8N808 338 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 LRTM2Q8N967 370 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 R3HDM4Q96D70 268 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 MED28Q9H204 178 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 CUBNO60494 3623 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 MARCH11A6NNE9 402 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 IFNA21P01568 189 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 LGALS7P47929 136 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 RBMS3Q6XE24 437 aaKnown RBP18.15■□□□□ 0.5
ACTN4-210ENST00000588618 RITA1Q96K30 269 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 TSNAXQ99598 290 aaKnown RBP18.15■□□□□ 0.5
ACTN4-210ENST00000588618 RNF5Q99942 180 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 DUXBA0A1W2PPF3 345 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 H3BUX3 64 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 ADAP1O75689 374 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 HOXB5P09067 269 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 G6PCP35575 357 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 SSX9Q7RTT3 188 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 LYZL2Q7Z4W2 148 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 EAF1Q96JC9 268 aaPredicted RBP18.15■□□□□ 0.5
ACTN4-210ENST00000588618 RHOVQ96L33 236 aa18.15■□□□□ 0.5
ACTN4-210ENST00000588618 MAST4O15021 2626 aa18.14■□□□□ 0.49
ACTN4-210ENST00000588618 FAM90A9PA6NNJ1 464 aa18.14■□□□□ 0.49
ACTN4-210ENST00000588618 VDAC1P21796 283 aa18.14■□□□□ 0.49
ACTN4-210ENST00000588618 FCN2Q15485 313 aa18.14■□□□□ 0.49
ACTN4-210ENST00000588618 MMDQ15546 238 aa18.14■□□□□ 0.49
ACTN4-210ENST00000588618 H2BFWTQ7Z2G1 175 aa18.14■□□□□ 0.49
ACTN4-210ENST00000588618 OR11H7Q8NGC8 314 aa18.14■□□□□ 0.49
ACTN4-210ENST00000588618 PITPNC1Q9UKF7 332 aa18.14■□□□□ 0.49
ACTN4-210ENST00000588618 NSD1Q96L73 2696 aaPredicted RBP18.14■□□□□ 0.49
ACTN4-210ENST00000588618 TNCP24821 2201 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 A0A0G2JRQ6 117 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 INAFM1C9JVW0 142 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 CCSO14618 274 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 CXCL3P19876 107 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 RRAS2P62070 204 aaPredicted RBP18.13■□□□□ 0.49
ACTN4-210ENST00000588618 VMA21Q3ZAQ7 101 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 VKORC1L1Q8N0U8 176 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 KIAA1456Q9P272 454 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 TMED3Q9Y3Q3 217 aa18.13■□□□□ 0.49
ACTN4-210ENST00000588618 SRRM4A7MD48 611 aaKnown RBP18.12■□□□□ 0.49
ACTN4-210ENST00000588618 MPTX1A8MV57 137 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 IGKV1-5P01602 117 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 EBI3Q14213 229 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 VSTM2AQ8TAG5 236 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 SEC22AQ96IW7 307 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 RAB18Q9NP72 206 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 NCBP2LA6PVI3 153 aaKnown RBP18.12■□□□□ 0.49
ACTN4-210ENST00000588618 FAM25EA8MYX2 175 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 BCAP31P51572 246 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 PLGLAQ15195 96 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 Q6YL49 198 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 FAM219AQ8IW50 185 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 OR5R1Q8NH85 324 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 SSMEM1Q8WWF3 244 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 C1RLQ9NZP8 487 aa18.12■□□□□ 0.49
ACTN4-210ENST00000588618 GOSR2O14653 212 aa18.11■□□□□ 0.49
ACTN4-210ENST00000588618 SULT1A3P0DMM9 295 aa18.11■□□□□ 0.49
ACTN4-210ENST00000588618 SULT1A4P0DMN0 295 aa18.11■□□□□ 0.49
ACTN4-210ENST00000588618 IZUMO4Q1ZYL8 232 aa18.11■□□□□ 0.49
ACTN4-210ENST00000588618 LSM10Q969L4 123 aaKnown RBP18.11■□□□□ 0.49
ACTN4-210ENST00000588618 ZNF48Q96MX3 618 aaPredicted RBP18.11■□□□□ 0.49
ACTN4-210ENST00000588618 TMEM140Q9NV12 185 aa18.11■□□□□ 0.49
ACTN4-210ENST00000588618 TCF19Q9Y242 345 aa18.11■□□□□ 0.49
ACTN4-210ENST00000588618 MMP24Q9Y5R2 645 aa18.11■□□□□ 0.49
ACTN4-210ENST00000588618 PLXNB1O43157 2135 aa18.11■□□□□ 0.49
ACTN4-210ENST00000588618 C13orf42A0A1B0GVH6 325 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 C5orf51A6NDU8 294 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 NBR2O15453 112 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 SPDEFO95238 335 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 SIX6O95475 246 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 IER3P46695 156 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 LY6EQ16553 131 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 GGNBP1Q5YKI7 109 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 THOC7Q6I9Y2 204 aaKnown RBP18.1■□□□□ 0.49
ACTN4-210ENST00000588618 SIGLECL1Q8N7X8 197 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 OR8H1Q8NGG4 311 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 PIFOQ8TCI5 191 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 CHAC2Q8WUX2 184 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 WDR89Q96FK6 387 aaPredicted RBP18.1■□□□□ 0.49
ACTN4-210ENST00000588618 MGAT4CQ9UBM8 478 aa18.1■□□□□ 0.49
ACTN4-210ENST00000588618 SLC25A17O43808 307 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 RBMXL2O75526 392 aaKnown RBP18.09■□□□□ 0.49
ACTN4-210ENST00000588618 OR2A4O95047 310 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 IGHV4-59P01825 116 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 P0C879 139 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 SAA1P0DJI8 122 aaPredicted RBP18.09■□□□□ 0.49
ACTN4-210ENST00000588618 CNTFRP26992 372 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 UBE2KP61086 200 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 NMSQ5H8A3 153 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 OR4A47Q6IF82 309 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 OR2A7Q96R45 310 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 SPIN2AQ99865 258 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 SPIN2BQ9BPZ2 258 aa18.09■□□□□ 0.49
ACTN4-210ENST00000588618 TET2Q6N021 2002 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms