RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TCF21O43680 179 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 CDS2O95674 445 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 HRASP01112 189 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 IGLV2-23P01705 113 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 LPAR6P43657 344 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 SRPXP78539 464 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 MMDQ15546 238 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 LYG2Q86SG7 212 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 MINDY2Q8NBR6 621 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 TMEM56Q96MV1 263 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 TMEM56-RWDD3S4R434 201 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 SRRM4A7MD48 611 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 M0QZK8 103 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 FGF16O43320 207 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 CHST1O43916 411 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 PRAF2O60831 178 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 IGKV1-39P01597 117 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 IGKV1D-39P04432 117 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 IL5P05113 134 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 NQO2P16083 231 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 F2RL1P55085 397 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 RAB25P57735 213 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 UBE2KP61086 200 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 TRIM16LQ309B1 348 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 FAM71E2Q8N5Q1 922 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 CHPT1Q8WUD6 406 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 IL22RA2Q969J5 263 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 NIPBLQ6KC79 2804 aaeCLIP13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 PIGBOS1A0A0B4J2F0 54 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 GPR137BO60478 399 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 DUS4LO95620 317 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 CNTFRP26992 372 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 RPL15P61313 204 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 UBA52P62987 128 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 PSG5Q15238 335 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 VMA21Q3ZAQ7 101 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 CADM3Q8N126 398 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 LRTM2Q8N967 370 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 LHFPL5Q8TAF8 219 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 RBPMSQ93062 196 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 R3HDM4Q96D70 268 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 RHOVQ96L33 236 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 DUX5Q96PT3 197 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 BEX1Q9HBH7 125 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 TNFRSF19Q9NS68 423 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 KIAA1456Q9P272 454 aa13.52□□□□□ -0.25
PRKCSH-203ENST00000586486 MARCH11A6NNE9 402 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 RRHO14718 337 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 ATG12O94817 140 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 DHFRP00374 187 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 SAA1P0DJI8 122 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 LGI3Q8N145 548 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 C5orf56Q8N8D9 126 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 Q8N9W7 124 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 VSTM2AQ8TAG5 236 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 SEC22AQ96IW7 307 aa13.51□□□□□ -0.25
PRKCSH-203ENST00000586486 NCBP2LA6PVI3 153 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 SLC25A17O43808 307 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 CRYGBP07316 175 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 ERVK-16P61578 105 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 ANKRD55Q3KP44 614 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 PUSL1Q8N0Z8 303 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 TEX45Q8NA69 505 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 ZNF431Q8TF32 576 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 CASTOR1Q8WTX7 329 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 MITD1Q8WV92 249 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 A0A0B4J2A0 478 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 DUXBA0A1W2PPF3 345 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 KRASP01116 189 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 AMY1AP04745 511 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 TMEM268Q5VZI3 342 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 OR4A47Q6IF82 309 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 ZNF695Q8IW36 515 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 SELENOHQ8IZQ5 122 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 VKORC1L1Q8N0U8 176 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 SEC22CQ9BRL7 303 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 GPN1Q9HCN4 374 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 BET1LQ9NYM9 111 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 METTL1Q9UBP6 276 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 SHPKQ9UHJ6 478 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 SIGLEC9Q9Y336 463 aa13.5□□□□□ -0.25
PRKCSH-203ENST00000586486 SNRPGP15A8MWD9 76 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 KBTBD11O94819 623 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 OR2A4O95047 310 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 IL6RP08887 468 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 FGF2P09038 288 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 P0C879 139 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 G6PCP35575 357 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 DMBX1Q8NFW5 382 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 OR52B4Q8NGK2 314 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 OR4A5Q8NH83 315 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 COQ8AQ8NI60 647 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 OR2A7Q96R45 310 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 PHB2Q99623 299 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 FBXL15Q9H469 300 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 TMEM140Q9NV12 185 aa13.49□□□□□ -0.25
PRKCSH-203ENST00000586486 PRR13Q9NZ81 148 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms