RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 RBMX2Q9Y388 322 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CELSR3Q9NYQ7 3312 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ANKRD12Q6UB98 2062 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 IGKV1D-42A0A075B6H8 117 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV3OR16-13A0A075B7E8 117 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A087WXM4 84 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV2OR16-5A0A0B4J2B6 119 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 KIR2DS1A0A191URI9 304 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 hADV38S2A0JD32 116 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF729A6NN14 1252 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 hCG_2039718K7EN88 272 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 NUPL2O15504 423 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 DENRO43583 198 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 IGLV3-1P01715 115 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 S100A6P06703 90 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CD37P11049 281 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 GZMHP20718 246 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 GADD45AP24522 165 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 KIR2DS4P43632 304 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TSPAN5P62079 268 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC35B1P78383 322 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 MLLT11Q13015 90 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 KIR2DS1Q14954 304 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CEACAM21Q3KPI0 293 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OGFRL1Q5TC84 451 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM42Q69YG0 159 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ASCL4Q6XD76 172 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 Q6ZRP5 223 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 MDP1Q86V88 176 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 LINC00311Q8N616 119 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 WDR31Q8NA23 367 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2K2Q8NGT1 345 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR1S1Q8NH92 325 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 FNDC9Q8TBE3 224 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ISOC1Q96CN7 298 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 NOL4LQ96MY1 436 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 THTPAQ9BU02 230 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TOLLIPQ9H0E2 274 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 METTL17Q9H7H0 456 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PLEKHF2Q9H8W4 249 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PLEKHA1Q9HB21 404 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ABRACLQ9P1F3 81 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PYGO1Q9Y3Y4 419 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF469Q96JG9 3925 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV7-81A0A0B4J1V7 117 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PSMB11A5LHX3 300 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CPSF4LA6NMK7 179 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 DEFB108AA8MXU0 73 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 H3BN98 237 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 M0R135 149 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 RGS5O15539 181 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PHF1O43189 567 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 NDUFB3O43676 98 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 DUSP14O95147 198 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHG4P01861 327 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CRYGCP07315 174 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR8U9P0C7N5 309 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ATF1P18846 271 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PSMB9P28065 219 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 MAS1LP35410 378 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CEACAM6P40199 344 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 HTR2BP41595 481 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CDKN2CP42773 168 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 UBE2AP49459 152 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CEBPGP53567 150 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 MTPNP58546 118 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PAX8Q06710 450 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 SRSF6Q13247 344 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR8G1Q15617 311 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 LRRC36Q1X8D7 754 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TIGITQ495A1 244 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 C9orf66Q5T8R8 295 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 DGAT2L6Q6ZPD8 337 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 SHISA6Q6ZSJ9 500 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 SSX7Q7RTT5 188 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PPP1R27Q86WC6 154 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ZIC4Q8N9L1 334 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR5D16Q8NGK9 328 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR8U1Q8NH10 309 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR4A5Q8NH83 315 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR5AK3PQ8NH89 298 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF420Q8TAQ5 688 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 C10orf105Q8TEF2 133 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ITLN1Q8WWA0 313 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB8BQ92930 207 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 S100PBPQ96BU1 408 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF799Q96GE5 643 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TEX37Q96LM6 180 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 NRIP2Q9BQI9 281 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 LINC00574Q9H8X3 128 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PATZ1Q9HBE1 687 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 DIABLOQ9NR28 239 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TP53TG3Q9ULZ0 132 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 SDK1Q7Z5N4 2213 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CSMD1Q96PZ7 3565 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 CUBNO60494 3623 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TRBV9A0A0B4J1U6 114 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV1-69-2A0A0G2JMI3 117 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 PNMA8CA0A1B0GUJ8 204 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 A6NDN8 102 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms