RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TMEM203Q969S6 136 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 CMSS1Q9BQ75 279 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 C12orf4Q9NQ89 552 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 FBXL7Q9UJT9 491 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 HSF4Q9ULV5 492 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TRDCB7Z8K6 153 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 M0R1X1 148 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SLC17A2O00624 439 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PROP1O75360 226 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PRH1P02810 166 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 FCGR2BP31994 310 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ATP5G2Q06055 141 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RAB11BQ15907 218 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 OGFRL1Q5TC84 451 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PHB2Q99623 299 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 VCXQ9H320 206 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SLC35D1Q9NTN3 355 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SCN3BQ9NY72 215 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RDH8Q9NYR8 311 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 MLXQ9UH92 298 aa9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 AK6Q9Y3D8 172 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-213ENST00000579605 DEFB4AO15263 64 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TUSC2O75896 110 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RANBP1P43487 201 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SERPINB10P48595 397 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TMEM50BP56557 158 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SSBP2P81877 361 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 MRPS15P82914 257 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RHOGP84095 191 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TMEM177Q53S58 311 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 LIPKQ5VXJ0 399 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 UXS1Q8NBZ7 420 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ARHGAP5-AS1Q96IT6 56 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TMEM68Q96MH6 324 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PECRQ9BY49 303 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 AKIP1Q9NQ31 210 aa9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ZNF230Q9UIE0 474 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 LSM2Q9Y333 95 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-213ENST00000579605 IGKV1-6A0A0C4DH72 117 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ZNF320A2RRD8 509 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 FOXI3A8MTJ6 420 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ARL6IP5O75915 188 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 HSMCR30P0CW71 290 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 MFAP2P55001 183 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 CBX3Q13185 183 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TRAM1Q15629 374 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TMEM91Q6ZNR0 172 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 OR56B1Q8NGI3 324 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 OR4A4PQ8NGN8 299 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 OR1L6Q8NGR2 347 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 GFI1Q99684 422 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RARRES2Q99969 163 aa9.72□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 BET1O15155 118 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 FABP7O15540 132 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 IGLV2-23P01705 113 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 CD3GP09693 182 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 CLDN12P56749 244 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 RPS25P62851 125 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 C2orf76Q3KRA6 126 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 PLAC9Q5JTB6 97 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 BTNL8Q6UX41 500 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 RBPMS2Q6ZRY4 209 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 FAM3DQ96BQ1 224 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 HARBI1Q96MB7 349 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 OR2D2Q9H210 308 aa9.71□□□□□ -0.86
CDK5RAP3-213ENST00000579605 KIR2DL5BA0A0G2JN68 375 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 KIR2DL5BA0A0G2JPC4 375 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 SHOXO15266 292 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 MPPED1O15442 326 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 DENRO43583 198 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 GGCTO75223 188 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 CRYGBP07316 175 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 OR9G9P0C7N8 305 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 PSMA1P25786 263 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 CALRP27797 417 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 TAGLNQ01995 201 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 TPBGQ13641 420 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 IRF3Q14653 427 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 RTL8BQ17RB0 113 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 SLC38A6Q8IZM9 456 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 KIR2DL5AQ8N109 375 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 OR2C3Q8N628 320 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 ADAD2Q8NCV1 583 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 OR5B3Q8NH48 314 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 OR10J5Q8NHC4 309 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 KIR2DL5BQ8NHK3 375 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 SDHAF2Q9NX18 166 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 RAB22AQ9UL26 194 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 TPRKBQ9Y3C4 175 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 RBM7Q9Y580 266 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 V9GY05 133 aa9.7□□□□□ -0.86
CDK5RAP3-213ENST00000579605 TMEM272A0A1B0GTI8 110 aa9.69□□□□□ -0.86
CDK5RAP3-213ENST00000579605 FAM223BA6NKX1 122 aa9.69□□□□□ -0.86
CDK5RAP3-213ENST00000579605 LGALS9O00182 355 aa9.69□□□□□ -0.86
CDK5RAP3-213ENST00000579605 IGHV3-23P01764 117 aa9.69□□□□□ -0.86
CDK5RAP3-213ENST00000579605 GSTT2P0CG29 244 aa9.69□□□□□ -0.86
CDK5RAP3-213ENST00000579605 GSTT2BP0CG30 244 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms