RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 SSX9Q7RTT3 188 aa11.14□□□□□ -0.63
TSEN54-206ENST00000579449 VKORC1L1Q8N0U8 176 aa11.14□□□□□ -0.63
TSEN54-206ENST00000579449 BCL6BQ8N143 479 aaPredicted RBP11.14□□□□□ -0.63
TSEN54-206ENST00000579449 DMBX1Q8NFW5 382 aa11.14□□□□□ -0.63
TSEN54-206ENST00000579449 OSR1Q8TAX0 266 aaPredicted RBP11.14□□□□□ -0.63
TSEN54-206ENST00000579449 LSM10Q969L4 123 aaKnown RBP11.14□□□□□ -0.63
TSEN54-206ENST00000579449 RRNAD1Q96FB5 475 aaKnown RBP11.14□□□□□ -0.63
TSEN54-206ENST00000579449 WDR89Q96FK6 387 aaPredicted RBP11.14□□□□□ -0.63
TSEN54-206ENST00000579449 RITA1Q96K30 269 aa11.14□□□□□ -0.63
TSEN54-206ENST00000579449 OR10C1Q96KK4 312 aa11.14□□□□□ -0.63
TSEN54-206ENST00000579449 SMR3AQ99954 134 aa11.14□□□□□ -0.63
TSEN54-206ENST00000579449 CHIAQ9BZP6 476 aa11.14□□□□□ -0.63
TSEN54-206ENST00000579449 ZNF436Q9C0F3 470 aaPredicted RBP11.14□□□□□ -0.63
TSEN54-206ENST00000579449 TLN2Q9Y4G6 2542 aa11.14□□□□□ -0.63
TSEN54-206ENST00000579449 MARCH11A6NNE9 402 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 CCNKO75909 580 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 IGKV1D-33P01593 117 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 IGKV1-33P01594 117 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 SNRNP70P08621 437 aaKnown RBP11.13□□□□□ -0.63
TSEN54-206ENST00000579449 FBP1P09467 338 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 P0C879 139 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 CD99P14209 185 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 BRS3P32247 399 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 FBLN7Q53RD9 439 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 FAM120AOSQ5T036 256 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 H2BFWTQ7Z2G1 175 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 AKAP14Q86UN6 197 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 TEX29Q8N6K0 151 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 RHOVQ96L33 236 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 C2orf50Q96LR7 162 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 PDCD10Q9BUL8 212 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 MMP24Q9Y5R2 645 aa11.13□□□□□ -0.63
TSEN54-206ENST00000579449 OR2A4O95047 310 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 LY6G6DO95868 133 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 MOSP00540 346 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 CNTFRP26992 372 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 LGALS7P47929 136 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 EBI3Q14213 229 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 HES1Q14469 280 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 HNF4GQ14541 408 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 IAH1Q2TAA2 248 aaPredicted RBP11.12□□□□□ -0.63
TSEN54-206ENST00000579449 DEFB112Q30KQ8 113 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 Q6ZRM9 215 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 THNSL2Q86YJ6 484 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 ZBTB8BQ8NAP8 495 aaPredicted RBP11.12□□□□□ -0.63
TSEN54-206ENST00000579449 OR2T10Q8NGZ9 312 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 C22orf15Q8WYQ4 148 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
TSEN54-206ENST00000579449 ST6GAL2Q96JF0 529 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 OR2A7Q96R45 310 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 SPIN2AQ99865 258 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 RNF5Q99942 180 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 SPIN2BQ9BPZ2 258 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 NEURL2Q9BR09 285 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 AIFM2Q9BRQ8 373 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 RANGRFQ9HD47 186 aaPredicted RBP11.12□□□□□ -0.63
TSEN54-206ENST00000579449 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
TSEN54-206ENST00000579449 TET2Q6N021 2002 aaPredicted RBP11.12□□□□□ -0.63
TSEN54-206ENST00000579449 TNCP24821 2201 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 A0A1B0GU03 582 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 MDFIC2A0A1B0GVS7 189 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 PFDN1O60925 122 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 GIPP09681 153 aaPredicted RBP11.11□□□□□ -0.63
TSEN54-206ENST00000579449 OR9G9P0C7N8 305 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 SAA1P0DJI8 122 aaPredicted RBP11.11□□□□□ -0.63
TSEN54-206ENST00000579449 SLC25A6P12236 298 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 FOSL1P15407 271 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 DYNLT3P51808 116 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 SRSF4Q08170 494 aaKnown RBP11.11□□□□□ -0.63
TSEN54-206ENST00000579449 CD300CQ08708 224 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 SMCO1Q147U7 214 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 THOC7Q6I9Y2 204 aaKnown RBP11.11□□□□□ -0.63
TSEN54-206ENST00000579449 OR4A47Q6IF82 309 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 PUSL1Q8N0Z8 303 aaKnown RBP11.11□□□□□ -0.63
TSEN54-206ENST00000579449 FYTTD1Q96QD9 318 aaKnown RBP11.11□□□□□ -0.63
TSEN54-206ENST00000579449 TSNAXQ99598 290 aaKnown RBP11.11□□□□□ -0.63
TSEN54-206ENST00000579449 SSX3Q99909 188 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 RANBP3Q9H6Z4 567 aaPredicted RBP11.11□□□□□ -0.63
TSEN54-206ENST00000579449 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 CACNG5Q9UF02 275 aa11.11□□□□□ -0.63
TSEN54-206ENST00000579449 TRAV3A0A0B4J244 114 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 IL6RP08887 468 aaPredicted RBP11.1□□□□□ -0.63
TSEN54-206ENST00000579449 FAM106CPP0CH98 169 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 TMEM11P17152 192 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 SRP14P37108 136 aaKnown RBP11.1□□□□□ -0.63
TSEN54-206ENST00000579449 F2RL1P55085 397 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 UBE2KP61086 200 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 RAP2BP61225 183 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 PSG5Q15238 335 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 LRRC75BQ2VPJ9 315 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 VMA21Q3ZAQ7 101 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 Q8N6K4 173 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 OR4D5Q8NGN0 318 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 PIFOQ8TCI5 191 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 NMES1Q9C002 83 aa11.1□□□□□ -0.63
TSEN54-206ENST00000579449 TMEM160Q9NX00 188 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms