RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 CATR1Q13166 79 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 ACTBL2Q562R1 376 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 PYHIN1Q6K0P9 492 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 MRPL41Q8IXM3 137 aaKnown RBP18.66■□□□□ 0.58
LIMD2-207ENST00000579329 OR5M8Q8NGP6 311 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 C15orf40Q8WUR7 153 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 MOB3AQ96BX8 217 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 ISOC1Q96CN7 298 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 UBE2E2Q96LR5 201 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 MIXL1Q9H2W2 232 aa18.66■□□□□ 0.58
LIMD2-207ENST00000579329 H3BMQ9 156 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 SOX15O60248 233 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 CREBL2O60519 120 aaPredicted RBP18.65■□□□□ 0.58
LIMD2-207ENST00000579329 RAB9AP51151 201 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 PRSS8Q16651 343 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 BEAN1Q3B7T3 259 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 ZNF818PQ6ZRF7 136 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 ZNF491Q8N8L2 437 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 OR6F1Q8NGZ6 308 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 GPHA2Q96T91 129 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 P2RX4Q99571 388 aa18.65■□□□□ 0.58
LIMD2-207ENST00000579329 CCL24O00175 119 aa18.64■□□□□ 0.57
LIMD2-207ENST00000579329 MRGPRG-AS1Q2M3A8 158 aa18.64■□□□□ 0.57
LIMD2-207ENST00000579329 OXLD1Q5BKU9 147 aa18.64■□□□□ 0.57
LIMD2-207ENST00000579329 IDO2Q6ZQW0 420 aa18.64■□□□□ 0.57
LIMD2-207ENST00000579329 LAX1Q8IWV1 398 aa18.64■□□□□ 0.57
LIMD2-207ENST00000579329 RCC1LQ96I51 464 aaKnown RBP18.64■□□□□ 0.57
LIMD2-207ENST00000579329 RAX2Q96IS3 184 aa18.64■□□□□ 0.57
LIMD2-207ENST00000579329 VSIG4Q9Y279 399 aa18.64■□□□□ 0.57
LIMD2-207ENST00000579329 CTDSP2O14595 271 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 IGLL1P15814 213 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 CD40LGP29965 261 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 BRWD1-AS2P59051 145 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 KIAA0141Q14154 515 aaPredicted RBP18.63■□□□□ 0.57
LIMD2-207ENST00000579329 TNXAQ16473 311 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 DEFB136Q30KP8 78 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 RNASE12Q5GAN4 147 aaKnown RBP18.63■□□□□ 0.57
LIMD2-207ENST00000579329 KPRPQ5T749 579 aaPredicted RBP18.63■□□□□ 0.57
LIMD2-207ENST00000579329 SPAG16Q8N0X2 631 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 VSTM2AQ8TAG5 236 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 TMEM68Q96MH6 324 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 DUX3Q96PT4 197 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 FXYD6Q9H0Q3 95 aa18.63■□□□□ 0.57
LIMD2-207ENST00000579329 RBFOX2O43251 390 aaKnown RBP eCLIP18.62■□□□□ 0.57
LIMD2-207ENST00000579329 DUS4LO95620 317 aaKnown RBP18.62■□□□□ 0.57
LIMD2-207ENST00000579329 GNRHRP30968 328 aa18.62■□□□□ 0.57
LIMD2-207ENST00000579329 TSPAN5P62079 268 aa18.62■□□□□ 0.57
LIMD2-207ENST00000579329 MMD2Q8IY49 270 aa18.62■□□□□ 0.57
LIMD2-207ENST00000579329 OR52I2Q8NH67 350 aa18.62■□□□□ 0.57
LIMD2-207ENST00000579329 ABHD1Q96SE0 405 aa18.62■□□□□ 0.57
LIMD2-207ENST00000579329 GNB4Q9HAV0 340 aa18.62■□□□□ 0.57
LIMD2-207ENST00000579329 CEPT1Q9Y6K0 416 aa18.62■□□□□ 0.57
LIMD2-207ENST00000579329 HRASP01112 189 aa18.61■□□□□ 0.57
LIMD2-207ENST00000579329 RUNX1Q01196 453 aa18.61■□□□□ 0.57
LIMD2-207ENST00000579329 VAX1Q5SQQ9 334 aa18.61■□□□□ 0.57
LIMD2-207ENST00000579329 AADACL3Q5VUY0 350 aa18.61■□□□□ 0.57
LIMD2-207ENST00000579329 OR51H1Q8NH63 302 aa18.61■□□□□ 0.57
LIMD2-207ENST00000579329 SLA2Q9H6Q3 261 aa18.61■□□□□ 0.57
LIMD2-207ENST00000579329 ZNF430Q9H8G1 570 aaPredicted RBP18.61■□□□□ 0.57
LIMD2-207ENST00000579329 KLK11Q9UBX7 282 aa18.61■□□□□ 0.57
LIMD2-207ENST00000579329 H3BUA1 57 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 ACTL6BO94805 426 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 OR2A4O95047 310 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 MRPS10P82664 201 aaKnown RBP18.6■□□□□ 0.57
LIMD2-207ENST00000579329 VKORC1L1Q8N0U8 176 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 POC5Q8NA72 575 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 CASTOR1Q8WTX7 329 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 SRSF12Q8WXF0 261 aaKnown RBP18.6■□□□□ 0.57
LIMD2-207ENST00000579329 OR2A7Q96R45 310 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 PHB2Q99623 299 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 AIFM2Q9BRQ8 373 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 MTFP1Q9UDX5 166 aa18.6■□□□□ 0.57
LIMD2-207ENST00000579329 I3L521 148 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 RAMP3O60896 148 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 KBTBD11O94819 623 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 CMTM1Q8IZ96 169 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 PUSL1Q8N0Z8 303 aaKnown RBP18.59■□□□□ 0.57
LIMD2-207ENST00000579329 CD300LFQ8TDQ1 290 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 FCAMRQ8WWV6 532 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 DIRAS2Q96HU8 199 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 RHOVQ96L33 236 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 MS4A10Q96PG2 267 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 OR5B12Q96R08 314 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 MCRIP2Q9BUT9 160 aaKnown RBP18.59■□□□□ 0.57
LIMD2-207ENST00000579329 GPR61Q9BZJ8 451 aa18.59■□□□□ 0.57
LIMD2-207ENST00000579329 C6orf62Q9GZU0 229 aaPredicted RBP18.59■□□□□ 0.57
LIMD2-207ENST00000579329 CCDC160A6NGH7 325 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 M0QYG6 137 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 GPR31O00270 319 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 HPRT1P00492 218 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 RAB25P57735 213 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 TPPP2P59282 170 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 FHL3Q13643 280 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 RNASE10Q5GAN6 216 aaKnown RBP18.58■□□□□ 0.56
LIMD2-207ENST00000579329 ASPHD1Q5U4P2 390 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 LPCAT3Q6P1A2 487 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 OR5T1Q8NG75 326 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 OR11H1Q8NG94 326 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 TMEM167AQ8TBQ9 72 aa18.58■□□□□ 0.56
LIMD2-207ENST00000579329 SLIRPQ9GZT3 109 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms