RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 NDUFB8O95169 186 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 OR2C1O95371 312 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 HLA-AP01891 365 aaKnown RBP6.4□□□□□ -1.38
CASC3-206ENST00000579238 FCGR3AP08637 254 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 GNAO1P09471 354 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 GSTT2P0CG29 244 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 GSTT2BP0CG30 244 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 SAA1P0DJI8 122 aaPredicted RBP6.4□□□□□ -1.38
CASC3-206ENST00000579238 PMS2P11Q13670 270 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 SPHARQ15513 63 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 ANKRD55Q3KP44 614 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 ZNF57Q68EA5 555 aaPredicted RBP6.4□□□□□ -1.38
CASC3-206ENST00000579238 CEMP1Q6PRD7 247 aaPredicted RBP6.4□□□□□ -1.38
CASC3-206ENST00000579238 TMEM61Q8N0U2 210 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 OR52B4Q8NGK2 314 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 CACNG8Q8WXS5 425 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 FAM3DQ96BQ1 224 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 GINS4Q9BRT9 223 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 CENPOQ9BU64 300 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 KCNK7Q9Y2U2 307 aa6.4□□□□□ -1.38
CASC3-206ENST00000579238 LSM2Q9Y333 95 aaKnown RBP6.4□□□□□ -1.38
CASC3-206ENST00000579238 AK6Q9Y3D8 172 aaKnown RBP6.4□□□□□ -1.38
CASC3-206ENST00000579238 KMT2AQ03164 3969 aa6.4□□□□□ -1.39
CASC3-206ENST00000579238 A0A0J9YWU9 116 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 TMEM213A2RRL7 107 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 ERICH4A6NGS2 130 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 LINC00473A8K010 186 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 NPIPB5A8MRT5 1133 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 A8MWP6 167 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 DENRO43583 198 aaKnown RBP6.39□□□□□ -1.39
CASC3-206ENST00000579238 CLDN12P56749 244 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 TNFRSF9Q07011 255 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 C2orf76Q3KRA6 126 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 FAM106AQ4KMX7 169 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 C10orf55Q5SWW7 151 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 LIPKQ5VXJ0 399 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 OR4A47Q6IF82 309 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 TMEM91Q6ZNR0 172 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 H1FOOQ8IZA3 346 aaPredicted RBP6.39□□□□□ -1.39
CASC3-206ENST00000579238 UXS1Q8NBZ7 420 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 UFD1Q92890 307 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 TMEM203Q969S6 136 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 RAB3CQ96E17 227 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 DCUN1D5Q9BTE7 237 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 MLXQ9UH92 298 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 FBXL7Q9UJT9 491 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 RAB22AQ9UL26 194 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 TP53TG1Q9Y2A0 90 aa6.39□□□□□ -1.39
CASC3-206ENST00000579238 KLK5Q9Y337 293 aaPredicted RBP6.39□□□□□ -1.39
CASC3-206ENST00000579238 TRAV25A0A0B4J276 109 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 TMEM272A0A1B0GTI8 110 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 ZNF320A2RRD8 509 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 DPPA5A6NC42 116 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 HMX3A6NHT5 357 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 TEX22C9J3V5 150 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 MFNGO00587 321 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 FCGR3BO75015 233 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 ARL6IP5O75915 188 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 SCAF4O95104 1147 aaKnown RBP6.38□□□□□ -1.39
CASC3-206ENST00000579238 IGHV3-23P01764 117 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 ATF4P18848 351 aaPredicted RBP6.38□□□□□ -1.39
CASC3-206ENST00000579238 GADD45AP24522 165 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 BMI1P35226 326 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 ARL3P36405 182 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 RPL27AP46776 148 aaKnown RBP6.38□□□□□ -1.39
CASC3-206ENST00000579238 PSMD7P51665 324 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 EWSR1Q01844 656 aaKnown RBP eCLIP6.38□□□□□ -1.39
CASC3-206ENST00000579238 MED22Q15528 200 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 TRAM1Q15629 374 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 TM4SF20Q53R12 229 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 CLEC19AQ6UXS0 136 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 Q6ZS49 121 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 Q6ZWC4 215 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 LYG2Q86SG7 212 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 MAFIPQ8WZ33 124 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 EEF1AKMT3Q96AZ1 226 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 CCDC140Q96MF4 163 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 FANCD2OSQ96PS1 177 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 OR51E2Q9H255 320 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 SLC2A9Q9NRM0 540 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 MRPS7Q9Y2R9 242 aaKnown RBP6.38□□□□□ -1.39
CASC3-206ENST00000579238 PRELID3BQ9Y3B1 194 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 SELENOKQ9Y6D0 94 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 V9GY05 133 aa6.38□□□□□ -1.39
CASC3-206ENST00000579238 PTGES3LE9PB15 166 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 UBE2CO00762 179 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 SPRY2O43597 315 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 DHFRP00374 187 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 CRYGCP07315 174 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 IL6RP08887 468 aaPredicted RBP6.37□□□□□ -1.39
CASC3-206ENST00000579238 ZNF735P0CB33 412 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 HIST1H1BP16401 226 aaKnown RBP6.37□□□□□ -1.39
CASC3-206ENST00000579238 HIST1H1DP16402 221 aaKnown RBP6.37□□□□□ -1.39
CASC3-206ENST00000579238 GNB3P16520 340 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 CD36P16671 472 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 PSMA1P25786 263 aaKnown RBP6.37□□□□□ -1.39
CASC3-206ENST00000579238 MAS1LP35410 378 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 APOC4P55056 127 aa6.37□□□□□ -1.39
CASC3-206ENST00000579238 PLA2G7Q13093 441 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms