RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 GPHA2Q96T91 129 aa8.97□□□□□ -0.97
TRAPPC8-204ENST00000578252 TSNAXQ99598 290 aaKnown RBP8.97□□□□□ -0.97
TRAPPC8-204ENST00000578252 TMEM222Q9H0R3 208 aa8.97□□□□□ -0.97
TRAPPC8-204ENST00000578252 RAB18Q9NP72 206 aa8.97□□□□□ -0.97
TRAPPC8-204ENST00000578252 C1RLQ9NZP8 487 aa8.97□□□□□ -0.97
TRAPPC8-204ENST00000578252 TCF19Q9Y242 345 aa8.97□□□□□ -0.97
TRAPPC8-204ENST00000578252 C9orf170A2RU37 121 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 A6NDX4 124 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 CLDN34H7C241 214 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 M0QZK8 103 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 SHOXO15266 292 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 HOXA3O43365 443 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 SFT2D2O95562 160 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 CRYZL1O95825 349 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 IGHV4-59P01825 116 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 HLA-AP01891 365 aaKnown RBP8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 IGKV1-16P04430 117 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 OR5AC1P0C628 307 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 NQO2P16083 231 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 ANXA7P20073 488 aaKnown RBP8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 LINC00205P59089 165 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 RPS16P62249 146 aaKnown RBP8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 SUPT4H1P63272 117 aaKnown RBP8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 PPP1R1AQ13522 171 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 OXA1LQ15070 435 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 LYG2Q86SG7 212 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 Q8N6K4 173 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 PIFOQ8TCI5 191 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 CHPT1Q8WUD6 406 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 IL22RA2Q969J5 263 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 HARBI1Q96MB7 349 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 GPN1Q9HCN4 374 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 KIAA1456Q9P272 454 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 VPREB3Q9UKI3 123 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 FN1P02751 2386 aaKnown RBP8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 SVEP1Q4LDE5 3571 aa8.96□□□□□ -0.98
TRAPPC8-204ENST00000578252 NBR2O15453 112 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 RAMP3O60896 148 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 OR2F2O95006 317 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 DUS4LO95620 317 aaKnown RBP8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 CDS2O95674 445 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 VSIG10L2P0DP72 767 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 SPNP16150 400 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 CD24P25063 80 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 LPAR6P43657 344 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 RAB25P57735 213 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 BRWD1-AS2P59051 145 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 HILS1P60008 231 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 ERVK-16P61578 105 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 DHRS2Q13268 280 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 MMDQ15546 238 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 POU2AF1Q16633 256 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 VMA21Q3ZAQ7 101 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 ZNF585BQ52M93 769 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 CADM3Q8N126 398 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 LGI3Q8N145 548 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 COQ8AQ8NI60 647 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 VSTM2AQ8TAG5 236 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 GLYATL2Q8WU03 294 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 TMEM56Q96MV1 263 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 RBM14Q96PK6 669 aaKnown RBP8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 KRTAP4-8Q9BYQ9 185 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 MOB4Q9Y3A3 225 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 TMEM56-RWDD3S4R434 201 aa8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 TEP1Q99973 2627 aaKnown RBP8.95□□□□□ -0.98
TRAPPC8-204ENST00000578252 A0A0B4J2A0 478 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 DUXBA0A1W2PPF3 345 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 DNAJC9-AS1A6NH13 148 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 SNRPGP15A8MWD9 76 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 FGF16O43320 207 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 TCF21O43680 179 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 CREBL2O60519 120 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 S1PR2O95136 353 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 NDUFA3O95167 84 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 UBE2KP61086 200 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 RPL15P61313 204 aaKnown RBP8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 TMEM187Q14656 261 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 SLC9A3R2Q15599 337 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 LY6EQ16553 131 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 SP6Q3SY56 376 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 ZNF695Q8IW36 515 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 LRTM2Q8N967 370 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 NPBQ8NG41 125 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 ZNF431Q8TF32 576 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 RBPMSQ93062 196 aaKnown RBP8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 R3HDM4Q96D70 268 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 PHB2Q99623 299 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 SLC25A33Q9BSK2 321 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 SHPKQ9UHJ6 478 aa8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 ANK3Q12955 4377 aaKnown RBP8.94□□□□□ -0.98
TRAPPC8-204ENST00000578252 MARCH11A6NNE9 402 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 RRHO14718 337 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 FGF2P09038 288 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 AKR1C2P52895 323 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 HNF4GQ14541 408 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 PSG5Q15238 335 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 TMEM268Q5VZI3 342 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 FAM219AQ8IW50 185 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 TEX45Q8NA69 505 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 OR4A5Q8NH83 315 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms