RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 RAB11BQ15907 218 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 FAM106AQ4KMX7 169 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 IGSF11Q5DX21 431 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 OR4A47Q6IF82 309 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 Q6ZWC4 215 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 LYG2Q86SG7 212 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 WFDC3Q8IUB2 231 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 CACNG8Q8WXS5 425 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 GINS4Q9BRT9 223 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 MND1Q9BWT6 205 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 TMEM213A2RRL7 107 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 DPPA5A6NC42 116 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 SPRY2O43597 315 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 SCAF4O95104 1147 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 DHFRP00374 187 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 CDK1P06493 297 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 SAA1P0DJI8 122 aaPredicted RBP8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 ATF4P18848 351 aaPredicted RBP8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 DUTP33316 252 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 ARL3P36405 182 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 PLAC9Q5JTB6 97 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 C8orf59Q8N0T1 100 aaPredicted RBP8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 DHRSXQ8N5I4 330 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 TMEM217Q8N7C4 229 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 UXS1Q8NBZ7 420 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 C5orf30Q96GV9 206 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 DCUN1D5Q9BTE7 237 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 CENPOQ9BU64 300 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 C8orf4Q9NR00 106 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 PLCXD1Q9NUJ7 323 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 MLXQ9UH92 298 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 FBXL7Q9UJT9 491 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 DMRT1Q9Y5R6 373 aa8.7□□□□□ -1.02
CTDNEP1-212ENST00000576613 TRAV25A0A0B4J276 109 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 LINC00473A8K010 186 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 NPIPB5A8MRT5 1133 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 DENRO43583 198 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 FCGR3AP08637 254 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 GSTT2P0CG29 244 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 GSTT2BP0CG30 244 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 C10orf55Q5SWW7 151 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 BTNL8Q6UX41 500 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 CLEC19AQ6UXS0 136 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 BPIFB6Q8NFQ5 453 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 OR1L6Q8NGR2 347 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 MARC2Q969Z3 335 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 EEF1AKMT3Q96AZ1 226 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 RAB3CQ96E17 227 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 MRPS7Q9Y2R9 242 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 SELENOKQ9Y6D0 94 aa8.69□□□□□ -1.02
CTDNEP1-212ENST00000576613 UBE2CO00762 179 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 FCGR3BO75015 233 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 ARL6IP5O75915 188 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 IGHV3-23P01764 117 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 GADD45AP24522 165 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 EWSR1Q01844 656 aaKnown RBP eCLIP8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 SPHARQ15513 63 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 DEFB135Q30KP9 77 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 KCTD9Q7L273 389 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 SLC38A6Q8IZM9 456 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 PACRGLQ8N7B6 248 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 VSTM2AQ8TAG5 236 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 FAM3DQ96BQ1 224 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 CCDC140Q96MF4 163 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 PRELID3BQ9Y3B1 194 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 AK6Q9Y3D8 172 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 KMT2AQ03164 3969 aa8.68□□□□□ -1.02
CTDNEP1-212ENST00000576613 HMX3A6NHT5 357 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 TEX22C9J3V5 150 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 DEDDO75618 318 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 GNAO1P09471 354 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 HIST1H1BP16401 226 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 CD36P16671 472 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 RPL27AP46776 148 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 CLDN12P56749 244 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 MED22Q15528 200 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 LAIR2Q6ISS4 152 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 OR2C3Q8N628 320 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 ZNF645Q8N7E2 425 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 STPG3Q8N7X2 389 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 UFD1Q92890 307 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 TMEM203Q969S6 136 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 CXorf58Q96LI9 332 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 FYTTD1Q96QD9 318 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 GFI1Q99684 422 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 OR51E2Q9H255 320 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 SLC2A9Q9NRM0 540 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 FKBP14Q9NWM8 211 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 KCNK7Q9Y2U2 307 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 S4R3C0 116 aa8.67□□□□□ -1.02
CTDNEP1-212ENST00000576613 TRBV7-1A0A0A6YYK4 115 aa8.66□□□□□ -1.02
CTDNEP1-212ENST00000576613 KIR2DL5BA0A0G2JN68 375 aa8.66□□□□□ -1.02
CTDNEP1-212ENST00000576613 KIR2DL5BA0A0G2JPC4 375 aa8.66□□□□□ -1.02
CTDNEP1-212ENST00000576613 KBTBD11O94819 623 aa8.66□□□□□ -1.02
CTDNEP1-212ENST00000576613 CRYGCP07315 174 aa8.66□□□□□ -1.02
CTDNEP1-212ENST00000576613 DEFA4P12838 97 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms