RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 CD24P25063 80 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 HABP2Q14520 560 aaPredicted RBP13.26□□□□□ -0.29
ERCC4-208ENST00000576348 PLGLAQ15195 96 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 IAH1Q2TAA2 248 aaPredicted RBP13.26□□□□□ -0.29
ERCC4-208ENST00000576348 DEFB112Q30KQ8 113 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 FAM219AQ8IW50 185 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 BCL6BQ8N143 479 aaPredicted RBP13.26□□□□□ -0.29
ERCC4-208ENST00000576348 OR5M8Q8NGP6 311 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 VSTM2AQ8TAG5 236 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 LSM10Q969L4 123 aaKnown RBP13.26□□□□□ -0.29
ERCC4-208ENST00000576348 RHOVQ96L33 236 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 SSX3Q99909 188 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 RNF5Q99942 180 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 CHIAQ9BZP6 476 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 MEGF9Q9H1U4 602 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 KIAA1456Q9P272 454 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 MMP24Q9Y5R2 645 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 SOX21Q9Y651 276 aaPredicted RBP13.26□□□□□ -0.29
ERCC4-208ENST00000576348 CSMD2Q7Z408 3487 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 DBX1A6NMT0 343 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 SNAPC5O75971 98 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 IGKV1-5P01602 117 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 MMDQ15546 238 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
ERCC4-208ENST00000576348 C9orf139Q6ZV77 190 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 THNSL2Q86YJ6 484 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 VKORC1L1Q8N0U8 176 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 SEC22AQ96IW7 307 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 EAF1Q96JC9 268 aaPredicted RBP13.25□□□□□ -0.29
ERCC4-208ENST00000576348 TMEM140Q9NV12 185 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 TMEM160Q9NX00 188 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 GSKIPQ9P0R6 139 aa13.25□□□□□ -0.29
ERCC4-208ENST00000576348 MDFIC2A0A1B0GVS7 189 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 NCBP2LA6PVI3 153 aaKnown RBP13.24□□□□□ -0.29
ERCC4-208ENST00000576348 PFDN1O60925 122 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 DYNLT3P51808 116 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 AANATQ16613 207 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 C2orf68Q2NKX9 166 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 OR4A47Q6IF82 309 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 AKAP14Q86UN6 197 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 OR11H7Q8NGC8 314 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 OR4A16Q8NH70 328 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 OR1S1Q8NH92 325 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 GPR146Q96CH1 333 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
ERCC4-208ENST00000576348 RANBP3Q9H6Z4 567 aaPredicted RBP13.24□□□□□ -0.29
ERCC4-208ENST00000576348 C1RLQ9NZP8 487 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 CACNG5Q9UF02 275 aa13.24□□□□□ -0.29
ERCC4-208ENST00000576348 ABCA1O95477 2261 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 A0A1B0GU03 582 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 H3BUX3 64 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 SLC25A17O43808 307 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 CCNKO75909 580 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 OR2A4O95047 310 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 SPDEFO95238 335 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 SAA1P0DJI8 122 aaPredicted RBP13.23□□□□□ -0.29
ERCC4-208ENST00000576348 HLA-GP17693 338 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 UBE2KP61086 200 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 CD83Q01151 205 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 PSG5Q15238 335 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 NMSQ5H8A3 153 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 C2orf50Q96LR7 162 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 OR2A7Q96R45 310 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 ZNF436Q9C0F3 470 aaPredicted RBP13.23□□□□□ -0.29
ERCC4-208ENST00000576348 PITPNC1Q9UKF7 332 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 CDC42EP3Q9UKI2 254 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 OTOGQ6ZRI0 2925 aa13.23□□□□□ -0.29
ERCC4-208ENST00000576348 FAM90A9PA6NNJ1 464 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 NBR2O15453 112 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 SCGB1D2O95969 90 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 SRD5A1P18405 259 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 CXCL3P19876 107 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 CYCSP99999 105 aaKnown RBP13.22□□□□□ -0.29
ERCC4-208ENST00000576348 SMCO1Q147U7 214 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 LY6EQ16553 131 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 POU2AF1Q16633 256 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 IZUMO4Q1ZYL8 232 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 ZBTB8BQ8NAP8 495 aaPredicted RBP13.22□□□□□ -0.29
ERCC4-208ENST00000576348 OR8H1Q8NGG4 311 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 OR4A5Q8NH83 315 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 OR5R1Q8NH85 324 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 RITA1Q96K30 269 aa13.22□□□□□ -0.29
ERCC4-208ENST00000576348 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.22□□□□□ -0.29
ERCC4-208ENST00000576348 METTL1Q9UBP6 276 aaKnown RBP13.22□□□□□ -0.29
ERCC4-208ENST00000576348 SETXQ7Z333 2677 aaKnown RBP13.22□□□□□ -0.29
ERCC4-208ENST00000576348 CSPG4Q6UVK1 2322 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 SRRM4A7MD48 611 aaKnown RBP13.21□□□□□ -0.29
ERCC4-208ENST00000576348 ACTL6BO94805 426 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 KBTBD11O94819 623 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 GIPP09681 153 aaPredicted RBP13.21□□□□□ -0.29
ERCC4-208ENST00000576348 SLC25A6P12236 298 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 CNTFRP26992 372 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 EBI3Q14213 229 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 Q71RC1 249 aaPredicted RBP13.21□□□□□ -0.29
ERCC4-208ENST00000576348 TEX45Q8NA69 505 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 CHAC2Q8WUX2 184 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 SSMEM1Q8WWF3 244 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 ASB13Q8WXK3 278 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 OR10C1Q96KK4 312 aa13.21□□□□□ -0.29
ERCC4-208ENST00000576348 BET1LQ9NYM9 111 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms