RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TMEM14DPA8MWL7 114 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 WBP4O75554 376 aaKnown RBP6.69□□□□□ -1.34
SMG6-218ENST00000575454 MYOD1P15172 320 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 CELP19835 753 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 GALP22466 123 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 UNC119Q13432 240 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 CDK10Q15131 360 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 SSX1Q16384 188 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 MRGPRG-AS1Q2M3A8 158 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 LINC00336Q6ZUF6 198 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 FAM89BQ8N5H3 189 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 OR6M1Q8NGM8 313 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 OR10J5Q8NHC4 309 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 CACNG8Q8WXS5 425 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 EEF1AKMT3Q96AZ1 226 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 SPAG8Q99932 426 aaPredicted RBP6.69□□□□□ -1.34
SMG6-218ENST00000575454 CMSS1Q9BQ75 279 aaKnown RBP6.69□□□□□ -1.34
SMG6-218ENST00000575454 HDHD3Q9BSH5 251 aaPredicted RBP6.69□□□□□ -1.34
SMG6-218ENST00000575454 C6orf62Q9GZU0 229 aaPredicted RBP6.69□□□□□ -1.34
SMG6-218ENST00000575454 C5orf66Q9H5L9 145 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 ZNF430Q9H8G1 570 aaPredicted RBP6.69□□□□□ -1.34
SMG6-218ENST00000575454 MRPL27Q9P0M9 148 aaKnown RBP6.69□□□□□ -1.34
SMG6-218ENST00000575454 UFC1Q9Y3C8 167 aa6.69□□□□□ -1.34
SMG6-218ENST00000575454 RBM7Q9Y580 266 aaKnown RBP6.69□□□□□ -1.34
SMG6-218ENST00000575454 TRBV7-1A0A0A6YYK4 115 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 IGKV1-6A0A0C4DH72 117 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 PNMA8CA0A1B0GUJ8 204 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 EFCAB10A6NFE3 127 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 NPIPB5A8MRT5 1133 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 BET1O15155 118 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 SOCS1O15524 211 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 FABP7O15540 132 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 CRYZL1O95825 349 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 C8orf88P0DMB2 117 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 MED14OSP0DP75 135 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 HIST1H1BP16401 226 aaKnown RBP6.68□□□□□ -1.34
SMG6-218ENST00000575454 EDN2P20800 178 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 PSMB6P28072 239 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 ELLP55199 621 aaPredicted RBP6.68□□□□□ -1.34
SMG6-218ENST00000575454 QRFPP83859 136 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 ACSM3Q53FZ2 586 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 LAMTOR1Q6IAA8 161 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 BTNL8Q6UX41 500 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 CLEC19AQ6UXS0 136 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 IDO2Q6ZQW0 420 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 VSTM2AQ8TAG5 236 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 C11orf45Q8TAV5 145 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 C2CD4CQ8TF44 421 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 FBLIM1Q8WUP2 373 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 LPAR5Q9H1C0 372 aa6.68□□□□□ -1.34
SMG6-218ENST00000575454 TRBV6-7A0A0A0MS04 114 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 TSPAN4O14817 238 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 MYL12BO14950 172 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 CLEC3BP05452 202 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 CD37P11049 281 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 DUTP33316 252 aaKnown RBP6.67□□□□□ -1.34
SMG6-218ENST00000575454 MAS1LP35410 378 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 WNT4P56705 351 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 ST3GAL4Q11206 333 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 RBMS2Q15434 407 aaKnown RBP6.67□□□□□ -1.34
SMG6-218ENST00000575454 ZNF585BQ52M93 769 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 RBM48Q5RL73 367 aaKnown RBP6.67□□□□□ -1.34
SMG6-218ENST00000575454 LRRTM1Q86UE6 522 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 OR56B1Q8NGI3 324 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 GALNT14Q96FL9 552 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 ARHGAP5-AS1Q96IT6 56 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 CXorf58Q96LI9 332 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 DCUN1D5Q9BTE7 237 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 CABLES2Q9BTV7 478 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 SLC2A9Q9NRM0 540 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 PRELID3BQ9Y3B1 194 aa6.67□□□□□ -1.34
SMG6-218ENST00000575454 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 A0A0A6YYD4 124 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 OR4C46A6NHA9 309 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 FOXI3A8MTJ6 420 aaPredicted RBP6.66□□□□□ -1.34
SMG6-218ENST00000575454 SLC22A5O76082 557 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 CDK1P06493 297 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 CRYGCP07315 174 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 CD3GP09693 182 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 SAA1P0DJI8 122 aaPredicted RBP6.66□□□□□ -1.34
SMG6-218ENST00000575454 DEFA4P12838 97 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 CMC4P56277 68 aaPredicted RBP6.66□□□□□ -1.34
SMG6-218ENST00000575454 TMEM50BP56557 158 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 KLK9Q2XQG4 91 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 HSD17B12Q53GQ0 312 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 IGSF11Q5DX21 431 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 CEACAM19Q7Z692 300 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 SETD9Q8NE22 299 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 FYTTD1Q96QD9 318 aaKnown RBP6.66□□□□□ -1.34
SMG6-218ENST00000575454 GINS4Q9BRT9 223 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 OR51E2Q9H255 320 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 MAP6D1Q9H9H5 199 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 PLGRKTQ9HBL7 147 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 SMPD3Q9NY59 655 aaPredicted RBP6.66□□□□□ -1.34
SMG6-218ENST00000575454 KLK9Q9UKQ9 250 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 MRPS7Q9Y2R9 242 aaKnown RBP6.66□□□□□ -1.34
SMG6-218ENST00000575454 FAT2Q9NYQ8 4349 aa6.66□□□□□ -1.34
SMG6-218ENST00000575454 DNAH2Q9P225 4427 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 HMX3A6NHT5 357 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms