RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 RAC3P60763 192 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 SF3B5Q9BWJ5 86 aaKnown RBP12.06□□□□□ -0.48
SMG6-215ENST00000574501 BET1LQ9NYM9 111 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 CLDN14O95500 239 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 COLCA1Q6ZS62 124 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 NIT1Q86X76 327 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 SFXN3Q9BWM7 321 aa12.06□□□□□ -0.48
SMG6-215ENST00000574501 GTF3C1Q12789 2109 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 IGHV2OR16-5A0A0B4J2B6 119 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 IGHV1OR15-9A0A0B4J2B8 117 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 NPIPB11E5RHQ5 1161 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 ZNF324O75467 553 aaPredicted RBP12.05□□□□□ -0.48
SMG6-215ENST00000574501 PRRX1P54821 245 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 TCL1AP56279 114 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 HYAL1Q12794 435 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 C5orf30Q96GV9 206 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 GNB1LQ9BYB4 327 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 PRRG4Q9BZD6 226 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 OR2D2Q9H210 308 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 PRDM6Q9NQX0 595 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 C19orf25Q9UFG5 118 aaPredicted RBP12.05□□□□□ -0.48
SMG6-215ENST00000574501 FREM1Q5H8C1 2179 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 IGHV3-64DA0A0J9YX35 117 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 C17orf98A8MV24 154 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 A8MXE2 369 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 P0C879 139 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 CD27P26842 260 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 SRIP30626 198 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 S100A7P31151 101 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 KLHDC1Q8N7A1 406 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 TCTEX1D1Q8N7M0 179 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 ABHD3Q8WU67 409 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 RAB1CQ92928 201 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 LOXL4Q96JB6 756 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 PRO3102Q9H379 93 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 SLC35D1Q9NTN3 355 aa12.05□□□□□ -0.48
SMG6-215ENST00000574501 TRAV9-1A0A075B6T8 112 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 C15orf62A8K5M9 175 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 CA2P00918 260 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 GLB1P16278 677 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 BRWD1-AS2P59051 145 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 FXYD3Q14802 87 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 GMPPAQ96IJ6 420 aaPredicted RBP12.04□□□□□ -0.48
SMG6-215ENST00000574501 WDR83OSQ9Y284 106 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 V9GYV3 84 aa12.04□□□□□ -0.48
SMG6-215ENST00000574501 IGHV2-70DA0A0C4DH43 119 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 MMP23AO75900 390 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 RNASE7Q9H1E1 156 aaKnown RBP12.03□□□□□ -0.48
SMG6-215ENST00000574501 TP73-AS1Q9UF72 201 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 COLQQ9Y215 455 aaPredicted RBP12.03□□□□□ -0.48
SMG6-215ENST00000574501 CACNA1DQ01668 2161 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 FAM166BA8MTA8 275 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 STAG3L2P0CL84 134 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 STAG3L3P0CL85 134 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 VAMP3Q15836 100 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 ZNF718Q3SXZ3 478 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 DCAF12Q5T6F0 453 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 Q6P435 159 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 H2BFWTQ7Z2G1 175 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 LINC00596Q86U02 117 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 TSKUQ8WUA8 353 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 BORCS7Q96B45 105 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 EAF1Q96JC9 268 aaPredicted RBP12.03□□□□□ -0.48
SMG6-215ENST00000574501 CLEC7AQ9BXN2 247 aa12.03□□□□□ -0.48
SMG6-215ENST00000574501 A0A0G2JMM0 328 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 A0A1W2PPB8 328 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 A0A1W2PRS3 328 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 ZNF503-AS2A6NEH8 195 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 KIR3DP1A8MWS1 328 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 FOXH1O75593 365 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 CXorf1O96002 111 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 TNFSF4P23510 183 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 MORN2Q502X0 79 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 PDLIM3Q53GG5 364 aaPredicted RBP12.02□□□□□ -0.48
SMG6-215ENST00000574501 OR10J3Q5JRS4 329 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 SPATA31B1PQ5VZV4 182 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 STUMQ69YW2 141 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 MRPL54Q6P161 138 aaKnown RBP12.02□□□□□ -0.48
SMG6-215ENST00000574501 ZNF497Q6ZNH5 498 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 TMEM136Q6ZRR5 245 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 GGNQ86UU5 652 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 DOLPP1Q86YN1 238 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 SSMEM1Q8WWF3 244 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 VPS25Q9BRG1 176 aa12.02□□□□□ -0.48
SMG6-215ENST00000574501 MRPS16Q9Y3D3 137 aaKnown RBP12.02□□□□□ -0.48
SMG6-215ENST00000574501 ADAMTS20P59510 1910 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 OR2H2O95918 312 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 BPIFB3P59826 476 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 TMEM249Q2WGJ8 235 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 SLC25A45Q8N413 288 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 ZNF645Q8N7E2 425 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 OR10D3Q8NH80 312 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 CHODLQ9H9P2 273 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 CLEC1BQ9P126 229 aa12.02□□□□□ -0.49
SMG6-215ENST00000574501 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 TRBV9A0A0B4J1U6 114 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 IGHV2-26A0A0B4J1V2 119 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 GJE1A6NN92 205 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms