RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ACTBL2Q562R1 376 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 ASPHD1Q5U4P2 390 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 TMEM65Q6PI78 240 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 VKORC1L1Q8N0U8 176 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 TCTEX1D1Q8N7M0 179 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 OR5H2Q8NGV7 314 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 DYNC2LI1Q8TCX1 351 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 UBE2E2Q96LR5 201 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 DCUN1D5Q9BTE7 237 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 EXTL2Q9UBQ6 330 aa21.57■■□□□ 1.04
SCARF1-207ENST00000573867 TAS2R46P59540 309 aa21.56■■□□□ 1.04
SCARF1-207ENST00000573867 TMEM267Q0VDI3 215 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-207ENST00000573867 PRSS8Q16651 343 aa21.56■■□□□ 1.04
SCARF1-207ENST00000573867 PDLIM3Q53GG5 364 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-207ENST00000573867 RNASE12Q5GAN4 147 aaKnown RBP21.56■■□□□ 1.04
SCARF1-207ENST00000573867 MOB3AQ96BX8 217 aa21.56■■□□□ 1.04
SCARF1-207ENST00000573867 OR5B12Q96R08 314 aa21.56■■□□□ 1.04
SCARF1-207ENST00000573867 ZNF2Q9BSG1 426 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-207ENST00000573867 FXYD6Q9H0Q3 95 aa21.56■■□□□ 1.04
SCARF1-207ENST00000573867 I3L521 148 aa21.55■■□□□ 1.04
SCARF1-207ENST00000573867 CTDSP2O14595 271 aa21.55■■□□□ 1.04
SCARF1-207ENST00000573867 CNIH1O95406 144 aa21.55■■□□□ 1.04
SCARF1-207ENST00000573867 LAX1Q8IWV1 398 aa21.55■■□□□ 1.04
SCARF1-207ENST00000573867 OR4S2Q8NH73 311 aa21.55■■□□□ 1.04
SCARF1-207ENST00000573867 BCL7BQ9BQE9 202 aa21.55■■□□□ 1.04
SCARF1-207ENST00000573867 RAMP3O60896 148 aa21.54■■□□□ 1.04
SCARF1-207ENST00000573867 GNRHRP30968 328 aa21.54■■□□□ 1.04
SCARF1-207ENST00000573867 HERV-K104P61576 105 aa21.54■■□□□ 1.04
SCARF1-207ENST00000573867 ZBTB34Q8NCN2 500 aa21.54■■□□□ 1.04
SCARF1-207ENST00000573867 RCC1LQ96I51 464 aaKnown RBP21.54■■□□□ 1.04
SCARF1-207ENST00000573867 ABHD1Q96SE0 405 aa21.54■■□□□ 1.04
SCARF1-207ENST00000573867 ZNF430Q9H8G1 570 aaPredicted RBP21.54■■□□□ 1.04
SCARF1-207ENST00000573867 VSIG4Q9Y279 399 aa21.54■■□□□ 1.04
SCARF1-207ENST00000573867 H3BMQ9 156 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 SULT1C2O00338 296 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 RCVRNP35243 200 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 FHL3Q13643 280 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 FOXB2Q5VYV0 432 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 OR5M8Q8NGP6 311 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 OR52I2Q8NH67 350 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 ISOC1Q96CN7 298 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 MS4A10Q96PG2 267 aa21.53■■□□□ 1.04
SCARF1-207ENST00000573867 ALX4Q9H161 411 aaPredicted RBP21.53■■□□□ 1.04
SCARF1-207ENST00000573867 RUNX1Q01196 453 aa21.52■■□□□ 1.04
SCARF1-207ENST00000573867 TNXAQ16473 311 aa21.52■■□□□ 1.04
SCARF1-207ENST00000573867 C10orf55Q5SWW7 151 aa21.52■■□□□ 1.04
SCARF1-207ENST00000573867 OR5T1Q8NG75 326 aa21.52■■□□□ 1.04
SCARF1-207ENST00000573867 CCDC59Q9P031 241 aaKnown RBP21.52■■□□□ 1.04
SCARF1-207ENST00000573867 KLK11Q9UBX7 282 aa21.52■■□□□ 1.04
SCARF1-207ENST00000573867 APELAP0DMC3 54 aa21.51■■□□□ 1.03
SCARF1-207ENST00000573867 SPAG16Q8N0X2 631 aa21.51■■□□□ 1.03
SCARF1-207ENST00000573867 PUSL1Q8N0Z8 303 aaKnown RBP21.51■■□□□ 1.03
SCARF1-207ENST00000573867 OR11H1Q8NG94 326 aa21.51■■□□□ 1.03
SCARF1-207ENST00000573867 CEPT1Q9Y6K0 416 aa21.51■■□□□ 1.03
SCARF1-207ENST00000573867 RGS5O15539 181 aa21.5■■□□□ 1.03
SCARF1-207ENST00000573867 RAB25P57735 213 aa21.5■■□□□ 1.03
SCARF1-207ENST00000573867 PYHIN1Q6K0P9 492 aa21.5■■□□□ 1.03
SCARF1-207ENST00000573867 OR6F1Q8NGZ6 308 aa21.5■■□□□ 1.03
SCARF1-207ENST00000573867 OR51H1Q8NH63 302 aa21.5■■□□□ 1.03
SCARF1-207ENST00000573867 SRSF12Q8WXF0 261 aaKnown RBP21.5■■□□□ 1.03
SCARF1-207ENST00000573867 MSGN1A6NI15 193 aa21.49■■□□□ 1.03
SCARF1-207ENST00000573867 M0QYG6 137 aa21.49■■□□□ 1.03
SCARF1-207ENST00000573867 KIR2DS2P43631 304 aa21.49■■□□□ 1.03
SCARF1-207ENST00000573867 POC5Q8NA72 575 aa21.49■■□□□ 1.03
SCARF1-207ENST00000573867 TNCP24821 2201 aa21.49■■□□□ 1.03
SCARF1-207ENST00000573867 RBFOX2O43251 390 aaKnown RBP eCLIP21.48■■□□□ 1.03
SCARF1-207ENST00000573867 TPPP2P59282 170 aa21.48■■□□□ 1.03
SCARF1-207ENST00000573867 SSX9Q7RTT3 188 aa21.48■■□□□ 1.03
SCARF1-207ENST00000573867 OR1N2Q8NGR9 330 aa21.48■■□□□ 1.03
SCARF1-207ENST00000573867 RHOVQ96L33 236 aa21.48■■□□□ 1.03
SCARF1-207ENST00000573867 SLIRPQ9GZT3 109 aaKnown RBP21.48■■□□□ 1.03
SCARF1-207ENST00000573867 MTFP1Q9UDX5 166 aa21.48■■□□□ 1.03
SCARF1-207ENST00000573867 SCOCQ9UIL1 159 aa21.48■■□□□ 1.03
SCARF1-207ENST00000573867 PGLYRP1O75594 196 aaPredicted RBP21.47■■□□□ 1.03
SCARF1-207ENST00000573867 TPPPO94811 219 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 KBTBD11O94819 623 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 OR2A4O95047 310 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 DUS4LO95620 317 aaKnown RBP21.47■■□□□ 1.03
SCARF1-207ENST00000573867 IGHV3-11P01762 117 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 HOXD3P31249 432 aaPredicted RBP21.47■■□□□ 1.03
SCARF1-207ENST00000573867 KRTAP10-11P60412 298 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 DEFA5Q01523 94 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 CATR1Q13166 79 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 VAX1Q5SQQ9 334 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 AADACL3Q5VUY0 350 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 MMD2Q8IY49 270 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 TMEM167AQ8TBQ9 72 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 OR2A7Q96R45 310 aa21.47■■□□□ 1.03
SCARF1-207ENST00000573867 A0A1B0GW64 132 aa21.46■■□□□ 1.03
SCARF1-207ENST00000573867 RBMXL2O75526 392 aaKnown RBP21.46■■□□□ 1.03
SCARF1-207ENST00000573867 TRGV3P03979 118 aa21.46■■□□□ 1.03
SCARF1-207ENST00000573867 RLN1P04808 185 aa21.46■■□□□ 1.03
SCARF1-207ENST00000573867 LGALS1P09382 135 aaKnown RBP21.46■■□□□ 1.03
SCARF1-207ENST00000573867 DGCR2P98153 550 aa21.46■■□□□ 1.03
SCARF1-207ENST00000573867 PHB2Q99623 299 aa21.46■■□□□ 1.03
SCARF1-207ENST00000573867 TINAGL1Q9GZM7 467 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-207ENST00000573867 SLA2Q9H6Q3 261 aa21.46■■□□□ 1.03
SCARF1-207ENST00000573867 AURKAIP1Q9NWT8 199 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-207ENST00000573867 E7EUB6 86 aa21.45■■□□□ 1.02
SCARF1-207ENST00000573867 NOL3O60936 208 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms