RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 EIF3GO75821 320 aaKnown RBP eCLIP3.89□□□□□ -1.79
CDC27-215ENST00000573550 OR7C1O76099 320 aaPredicted RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 PRH1P02810 166 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 IRF2P14316 349 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 B4GALT1P15291 398 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 ZNF14P17017 642 aaPredicted RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 F2RP25116 425 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 NFYBP25208 207 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 ATP6V0CP27449 155 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 GNRHRP30968 328 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 OPRM1P35372 400 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 ARR3P36575 388 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 RPL35P42766 123 aaKnown RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 ARHGDIBP52566 201 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 FXYD4P59646 89 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 RPS23P62266 143 aaKnown RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 SERF2P84101 59 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 CEACAM16Q2WEN9 425 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 PIGYQ3MUY2 71 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 C16orf54Q6UWD8 224 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 IL17RELQ6ZVW7 336 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 NUFIP2Q7Z417 695 aaKnown RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 ZNF695Q8IW36 515 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 SELENOHQ8IZQ5 122 aaKnown RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 TMEM252Q8N6L7 170 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 TCTEX1D1Q8N7M0 179 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 ZNF565Q8N9K5 539 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 OR5A2Q8NGI9 324 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 OR52M1Q8NGK5 317 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 OR5L1Q8NGL2 311 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 OR10D3Q8NH80 312 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 OR2AE1Q8NHA4 323 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 FAM213BQ8TBF2 198 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 TCTEX1D2Q8WW35 142 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 MR1Q95460 341 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 PINX1Q96BK5 328 aaKnown RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 MUCL1Q96DR8 90 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 ALKBH3Q96Q83 286 aaPredicted RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 P2RX4Q99571 388 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 SSX3Q99909 188 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 DDA1Q9BW61 102 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 EIF5A2Q9GZV4 153 aaKnown RBP3.89□□□□□ -1.79
CDC27-215ENST00000573550 OR51M1Q9H341 326 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 ZNF442Q9H7R0 627 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 WFDC1Q9HC57 220 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 RPS10P5Q9NQ39 176 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 RNF115Q9Y4L5 304 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 TIMM9Q9Y5J7 89 aa3.89□□□□□ -1.79
CDC27-215ENST00000573550 CACNA1GO43497 2377 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 IGHV3-15A0A0B4J1V0 119 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 IGSF23A1L1A6 192 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 NKX2-6A6NCS4 301 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 SLC22A20A6NK97 555 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 RNF212BA8MTL3 300 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 TRAPPC2LH3BP13 241 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.88□□□□□ -1.79
CDC27-215ENST00000573550 J3QT63 122 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 M0R036 132 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 WRBO00258 174 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 PPIHO43447 177 aaKnown RBP3.88□□□□□ -1.79
CDC27-215ENST00000573550 CSN3P07498 182 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 TDGF1P13385 188 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 MC5RP33032 325 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 CYB561P49447 251 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 ASCL1P50553 236 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 RND2P52198 227 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 LMO4P61968 165 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 RPL23AP62750 156 aaKnown RBP3.88□□□□□ -1.79
CDC27-215ENST00000573550 GNG3P63215 75 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 HBG1P69891 147 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 HBG2P69892 147 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 HLA-DRB3P79483 266 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 PAX5Q02548 391 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 HERPUD1Q15011 391 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 AKR1C8PQ5T2L2 129 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 TMEM182Q6ZP80 229 aaPredicted RBP3.88□□□□□ -1.79
CDC27-215ENST00000573550 RBPMS2Q6ZRY4 209 aaKnown RBP3.88□□□□□ -1.79
CDC27-215ENST00000573550 SLC25A26Q70HW3 274 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 MRPL21Q7Z2W9 205 aaKnown RBP3.88□□□□□ -1.79
CDC27-215ENST00000573550 ZNF573Q86YE8 665 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 HSD17B11Q8NBQ5 300 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 OR56B2PQ8NGI1 322 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 OR5C1Q8NGR4 320 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 OR2G3Q8NGZ4 309 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 CLDND2Q8NHS1 167 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 MBD3L1Q8WWY6 194 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 FAM173AQ9BQD7 235 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 NIPSNAP3BQ9BS92 247 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 AGMATQ9BSE5 352 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 SMIM3Q9BZL3 60 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 STRADBQ9C0K7 418 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 TOLLIPQ9H0E2 274 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 SH3BGRL3Q9H299 93 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 SLC7A10Q9NS82 523 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 UNC80Q8N2C7 3258 aa3.88□□□□□ -1.79
CDC27-215ENST00000573550 XIRP2A4UGR9 3374 aa3.87□□□□□ -1.79
CDC27-215ENST00000573550 SZT2Q5T011 3432 aa3.87□□□□□ -1.79
CDC27-215ENST00000573550 TRBV24-1A0A075B6N3 115 aa3.87□□□□□ -1.79
CDC27-215ENST00000573550 C21orf140B9A014 251 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms