RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 C1QL1O75973 258 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 RAB4BP61018 213 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 SLC38A11Q08AI6 406 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 ETFRF1Q6IPR1 90 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 OR2T10Q8NGZ9 312 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 GAFA1Q96PS6 74 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 RPH3ALQ9UNE2 315 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 OR51B2Q9Y5P1 312 aa8.41□□□□□ -1.06
SMG6-213ENST00000573166 TRBV6-7A0A0A0MS04 114 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 FAM74A7A6NL05 159 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 MARCH11A6NNE9 402 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 FGF7P21781 194 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 GATA4P43694 442 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 HOXA4Q00056 320 aaPredicted RBP8.4□□□□□ -1.06
SMG6-213ENST00000573166 FAM74A3Q4VXF1 159 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 DHRS7BQ6IAN0 325 aaPredicted RBP8.4□□□□□ -1.06
SMG6-213ENST00000573166 RTN4RL2Q86UN3 420 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 MAPK1IP1LQ8NDC0 245 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 LFNGQ8NES3 379 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 OR5C1Q8NGR4 320 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 NANPQ8TBE9 248 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 SLC2A8Q9NY64 477 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 ZNF581Q9P0T4 197 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 DUXBA0A1W2PPF3 345 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 ZNF705FA8MVS1 300 aaPredicted RBP8.4□□□□□ -1.06
SMG6-213ENST00000573166 S1PR2O95136 353 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 ZNF705DP0CH99 300 aaPredicted RBP8.4□□□□□ -1.06
SMG6-213ENST00000573166 ZNF705BP0CI00 300 aaPredicted RBP8.4□□□□□ -1.06
SMG6-213ENST00000573166 ZNF273Q14593 569 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 TMEM200BQ69YZ2 307 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 TMEM182Q6ZP80 229 aaPredicted RBP8.4□□□□□ -1.06
SMG6-213ENST00000573166 WDR86Q86TI4 376 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 VKORC1L1Q8N0U8 176 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 BPIFCQ8NFQ6 507 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 SFT2D1Q8WV19 159 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 C20orf24Q9BUV8 137 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 IGKV1D-8A0A087WSZ0 117 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 ZNF705GA8MUZ8 300 aaPredicted RBP8.4□□□□□ -1.06
SMG6-213ENST00000573166 NDUFS8O00217 210 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 YPEL1O60688 119 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 BATFQ16520 125 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 TMEM155Q4W5P6 130 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 MORN2Q502X0 79 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 PRSS54Q6PEW0 395 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 YPEL2Q96QA6 119 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 TMEM140Q9NV12 185 aa8.4□□□□□ -1.06
SMG6-213ENST00000573166 GOSR1O95249 250 aa8.4□□□□□ -1.07
SMG6-213ENST00000573166 ZP3P21754 424 aa8.4□□□□□ -1.07
SMG6-213ENST00000573166 HTD2P86397 168 aa8.4□□□□□ -1.07
SMG6-213ENST00000573166 GUSBP1Q15486 140 aa8.4□□□□□ -1.07
SMG6-213ENST00000573166 IZUMO4Q1ZYL8 232 aa8.4□□□□□ -1.07
SMG6-213ENST00000573166 Q6P435 159 aa8.4□□□□□ -1.07
SMG6-213ENST00000573166 HEPN1Q6WQI6 88 aa8.4□□□□□ -1.07
SMG6-213ENST00000573166 MMP24Q9Y5R2 645 aa8.4□□□□□ -1.07
SMG6-213ENST00000573166 OR2A4O95047 310 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 NPY1RP25929 384 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 OR2A7Q96R45 310 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 MRPL20Q9BYC9 149 aaKnown RBP8.39□□□□□ -1.07
SMG6-213ENST00000573166 ARV1Q9H2C2 271 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 NIT2Q9NQR4 276 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 PPP1R2P9O14990 202 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 GNG7O60262 68 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 OR7C2O60412 319 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 IGKV1D-33P01593 117 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 IGKV1-33P01594 117 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 PF4V1P10720 104 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 NPBWR1P48145 328 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 DVL1P1P54792 670 aaPredicted RBP8.39□□□□□ -1.07
SMG6-213ENST00000573166 ASCL4Q6XD76 172 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 ZNF418Q8TF45 676 aaPredicted RBP8.39□□□□□ -1.07
SMG6-213ENST00000573166 COQ2Q96H96 371 aa8.39□□□□□ -1.07
SMG6-213ENST00000573166 IGKV1D-13A0A0B4J2D9 117 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 IGKV1-13P0DP09 117 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 BPIFB3P59826 476 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 QRFPP83859 136 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 ANKRD55Q3KP44 614 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 UNQ5815/PRO19632Q6UWF5 114 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 DHRS11Q6UWP2 260 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 AP1S3Q96PC3 154 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 USP9XQ93008 2570 aaPredicted RBP8.38□□□□□ -1.07
SMG6-213ENST00000573166 A0A0U1RQK1 487 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 TRIM77I1YAP6 450 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 COX7A2P2O60397 106 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 NAPSAO96009 420 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 RD3LP0DJH9 198 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 CD24P25063 80 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 LCN15Q6UWW0 184 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 CLEC9AQ6UXN8 241 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 DNM1P46Q6ZS02 220 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.38□□□□□ -1.07
SMG6-213ENST00000573166 Q8TCH9 128 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 TP53RKQ96S44 253 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 NMES1Q9C002 83 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 TNRC18O15417 2968 aaPredicted RBP8.38□□□□□ -1.07
SMG6-213ENST00000573166 IGHV3-21A0A0B4J1V1 117 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 IGLV3-1P01715 115 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 ACOT6Q3I5F7 207 aaPredicted RBP8.38□□□□□ -1.07
SMG6-213ENST00000573166 ZNF660Q6AZW8 331 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms