RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 YPEL4Q96NS1 127 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 NPCDR1Q9BY65 106 aa13.43□□□□□ -0.26
POLR2A-201ENST00000572844 SAA2-SAA4A0A096LPE2 208 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 TRGV8A0A0C4DH27 118 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 hADV38S2A0JD32 116 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 B4DEV8 164 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 IGKV1D-33P01593 117 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 IGKV1-33P01594 117 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 SAA2P0DJI9 122 aaPredicted RBP13.42□□□□□ -0.26
POLR2A-201ENST00000572844 DAOP14920 347 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 MRPS11P82912 194 aaKnown RBP13.42□□□□□ -0.26
POLR2A-201ENST00000572844 RBPJQ06330 500 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 RBMS3Q6XE24 437 aaKnown RBP13.42□□□□□ -0.26
POLR2A-201ENST00000572844 C1orf229Q6ZS94 237 aaPredicted RBP13.42□□□□□ -0.26
POLR2A-201ENST00000572844 DEFB108BQ8NET1 73 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 CA5BP1Q8WTZ4 195 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 SNRNP40Q96DI7 357 aaKnown RBP13.42□□□□□ -0.26
POLR2A-201ENST00000572844 TMEM140Q9NV12 185 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 RPUSD1Q9UJJ7 312 aaKnown RBP13.42□□□□□ -0.26
POLR2A-201ENST00000572844 WDR83OSQ9Y284 106 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 LINC00312Q9Y6C7 94 aa13.42□□□□□ -0.26
POLR2A-201ENST00000572844 TRAV38-1A0A0B4J264 116 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 A0A1W2PPH5 198 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 C1orf196B1AJZ1 125 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 MPDU1O75352 247 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 FBP1P09467 338 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 TMPRSS3P57727 454 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 OR2B8PP59922 312 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 MEF2CQ06413 473 aaPredicted RBP13.41□□□□□ -0.26
POLR2A-201ENST00000572844 FAM90A2PQ658T7 463 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 FAM216BQ8N7L0 139 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 ZNF709Q8N972 641 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 LHX4Q969G2 390 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 SAV1Q9H4B6 383 aaPredicted RBP13.41□□□□□ -0.26
POLR2A-201ENST00000572844 SIRT7Q9NRC8 400 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 CXorf65A6NEN9 183 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 ZFP92A6NM28 416 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 AGAP20933 346 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 FGF8P55075 233 aaPredicted RBP13.41□□□□□ -0.26
POLR2A-201ENST00000572844 PNRC1Q12796 327 aaPredicted RBP13.41□□□□□ -0.26
POLR2A-201ENST00000572844 HABP2Q14520 560 aaPredicted RBP13.41□□□□□ -0.26
POLR2A-201ENST00000572844 SLC25A48Q6ZT89 311 aaKnown RBP13.41□□□□□ -0.26
POLR2A-201ENST00000572844 C1orf87Q8N0U7 546 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 SCNM1Q9BWG6 230 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 ACTR3CQ9C0K3 210 aaPredicted RBP13.41□□□□□ -0.26
POLR2A-201ENST00000572844 NGBQ9NPG2 151 aa13.41□□□□□ -0.26
POLR2A-201ENST00000572844 DSPP15924 2871 aaKnown RBP13.4□□□□□ -0.26
POLR2A-201ENST00000572844 A0A1W2PPE2 198 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 C15orf61A6NNL5 157 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 OR2C1O95371 312 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 RAB5AP20339 215 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 HOXA1P49639 335 aaPredicted RBP13.4□□□□□ -0.26
POLR2A-201ENST00000572844 TFF3Q07654 80 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 SPINK9Q5DT21 86 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 UTF1Q5T230 341 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 SSX9Q7RTT3 188 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 OR10G9Q8NGN4 311 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 OR10G7Q8NGN6 311 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 FOXA2Q9Y261 457 aaPredicted RBP13.4□□□□□ -0.26
POLR2A-201ENST00000572844 ICE1Q9Y2F5 2266 aa13.4□□□□□ -0.26
POLR2A-201ENST00000572844 IGHV3-7P01780 117 aa13.4□□□□□ -0.27
POLR2A-201ENST00000572844 CD1BP29016 333 aa13.4□□□□□ -0.27
POLR2A-201ENST00000572844 CCL8P80075 99 aa13.4□□□□□ -0.27
POLR2A-201ENST00000572844 DLK1P80370 383 aa13.4□□□□□ -0.27
POLR2A-201ENST00000572844 ZNF383Q8NA42 475 aa13.4□□□□□ -0.27
POLR2A-201ENST00000572844 LEAP2Q969E1 77 aa13.4□□□□□ -0.27
POLR2A-201ENST00000572844 ISOC2Q96AB3 205 aa13.4□□□□□ -0.27
POLR2A-201ENST00000572844 PRELID1Q9Y255 219 aa13.4□□□□□ -0.27
POLR2A-201ENST00000572844 PRSS46E5RG02 174 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 GFRA3O60609 400 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 HRASP01112 189 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 RAB11AP62491 216 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 TMEM249Q2WGJ8 235 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 ACOT6Q3I5F7 207 aaPredicted RBP13.39□□□□□ -0.27
POLR2A-201ENST00000572844 LYG1Q8N1E2 194 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 RND1Q92730 232 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 GAL3ST2Q9H3Q3 398 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 TMEM14BQ9NUH8 114 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 DCAF16Q9NXF7 216 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 TCF19Q9Y242 345 aa13.39□□□□□ -0.27
POLR2A-201ENST00000572844 IFNA10P01566 189 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 IFNA4P05014 189 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 IL6RP08887 468 aaPredicted RBP13.38□□□□□ -0.27
POLR2A-201ENST00000572844 CEBPGP53567 150 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 TGIF2LYQ8IUE0 185 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 FAM24BQ8N5W8 94 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 Q8N7P7 452 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 RHOVQ96L33 236 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 VKORC1Q9BQB6 163 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 HEYLQ9NQ87 328 aaPredicted RBP13.38□□□□□ -0.27
POLR2A-201ENST00000572844 MANBALQ9NQG1 85 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 LAMA5O15230 3695 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 ACACAQ13085 2346 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 TRAV3A0A0B4J244 114 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 A0A1W2PPE3 182 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 SEC14L6B5MCN3 397 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 TMEM178BH3BS89 294 aa13.38□□□□□ -0.27
POLR2A-201ENST00000572844 TNFRSF13BO14836 293 aaPredicted RBP13.38□□□□□ -0.27
POLR2A-201ENST00000572844 CYB5BO43169 146 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms