RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 FER1L6-AS2Q96M78 137 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 CNOT1A5YKK6 2376 aaKnown RBP8.98□□□□□ -0.97
CCDC40-207ENST00000572253 M0R143 59 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 HPRT1P00492 218 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 C1QTNF9P0C862 333 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 PLA2G5P39877 138 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 ZNF90Q03938 601 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 RAB31Q13636 194 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 LTC4SQ16873 150 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 CMTM2Q8TAZ6 248 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 KLF14Q8TD94 323 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-207ENST00000572253 COQ2Q96H96 371 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 GMPPAQ96IJ6 420 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-207ENST00000572253 UHRF2Q96PU4 802 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 FAM90A9PA6NNJ1 464 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 IFNL4K9M1U5 179 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 OR4A8P0C604 315 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 ARL14EPLP0DKL9 152 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 SSTR5P35346 364 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 TPPP2P59282 170 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 ERVFC1-1P60608 527 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 ARG2P78540 354 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 TMEM144Q7Z5S9 345 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 LINC00473A8K010 186 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 SOX8P57073 446 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 MZT1Q08AG7 82 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 GCSAMLQ5JQS6 135 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 PPP1R35Q8TAP8 253 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 TMEM204Q9BSN7 226 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 VCANP13611 3396 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 TRAV9-1A0A075B6T8 112 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 COTL1Q14019 142 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 EDDM3AQ14507 147 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 DMRTC2Q8IXT2 367 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-207ENST00000572253 OR13A1Q8NGR1 328 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 WFIKKN1Q96NZ8 548 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 TUBG2Q9NRH3 451 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 ELOVL5Q9NYP7 299 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 C9orf172C9J069 976 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 M0R1X1 148 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 LYZL6O75951 148 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 GCH1P30793 250 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 BRWD1-AS2P59051 145 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 NUTF2P61970 127 aaKnown RBP8.97□□□□□ -0.97
CCDC40-207ENST00000572253 C1orf194Q5T5A4 169 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 FAM53AQ6NSI3 398 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-207ENST00000572253 DERL1Q9BUN8 251 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 ENY2Q9NPA8 101 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 APC2O95996 2303 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 OR9G9P0C7N8 305 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 STAG3L2P0CL84 134 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 STAG3L3P0CL85 134 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 MPV17P39210 176 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 PAFAH1B2P68402 229 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 HTD2P86397 168 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 TPRX1Q8N7U7 411 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 FOXJ2Q9P0K8 574 aa8.97□□□□□ -0.97
CCDC40-207ENST00000572253 ARHGAP21Q5T5U3 1957 aa8.96□□□□□ -0.97
CCDC40-207ENST00000572253 TMEM105Q8N8V8 129 aa8.96□□□□□ -0.97
CCDC40-207ENST00000572253 GALR2O43603 387 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-207ENST00000572253 HNF1AP20823 631 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 RHOBP62745 196 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 FOXF2Q12947 444 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 ZNF124Q15973 351 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 LPAL2Q16609 132 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 MIC13Q5XKP0 118 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 TREML4Q6UXN2 200 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 TMEM178AQ8NBL3 297 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 S1PR3Q99500 378 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 KMT2EQ8IZD2 1858 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 EREGO14944 169 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 IGHV1-2P23083 117 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 KIR2DS2P43631 304 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 TMEM256Q8N2U0 113 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 MDS2Q8NDY4 140 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 OR52E5Q8NH55 327 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 TBX15Q96SF7 602 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 FAM234AQ9H0X4 552 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 CBLN4Q9NTU7 201 aa8.96□□□□□ -0.98
CCDC40-207ENST00000572253 PGPEP1LA6NFU8 196 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 TDGF1P13385 188 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 SELLP14151 372 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 CRISP2P16562 243 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 DUTP33316 252 aaKnown RBP8.95□□□□□ -0.98
CCDC40-207ENST00000572253 RANP62826 216 aaKnown RBP8.95□□□□□ -0.98
CCDC40-207ENST00000572253 PRSS8Q16651 343 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 ZNF718Q3SXZ3 478 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 TEX38Q6PEX7 206 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 WDR82Q6UXN9 313 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 FAM216AQ8WUB2 273 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 ZCCHC14Q8WYQ9 949 aaKnown RBP8.95□□□□□ -0.98
CCDC40-207ENST00000572253 SPRY4Q9C004 299 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 MS4A5Q9H3V2 200 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 NPVFQ9HCQ7 196 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 SPEGQ15772 3267 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 SCO2A0A1W2PP80 73 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 ADMP35318 185 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 TIMP3P35625 211 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 YPEL3P61236 119 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-207ENST00000572253 ZNF705AQ6ZN79 300 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms