RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MT-ND4P03905 459 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 AKAIN1P0CW23 69 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 VDAC1P21796 283 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 PRKACBP22694 351 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 ACKR3P25106 362 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 FAUP35544 74 aaKnown RBP5.21□□□□□ -1.58
CHD3-213ENST00000571249 PTGFRP43088 359 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 EIF2B2P49770 351 aaKnown RBP5.21□□□□□ -1.58
CHD3-213ENST00000571249 SNU13P55769 128 aaKnown RBP5.21□□□□□ -1.58
CHD3-213ENST00000571249 EDDM3BP56851 147 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 RRAS2P62070 204 aaPredicted RBP5.21□□□□□ -1.58
CHD3-213ENST00000571249 FAM3AP98173 230 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 TNFRSF9Q07011 255 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 RIPPLY1Q0D2K3 151 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 KISS1Q15726 138 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 UBE2V2Q15819 145 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 ATAD3CQ5T2N8 411 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 LYG2Q86SG7 212 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 ABHD12Q8N2K0 398 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 SYT8Q8NBV8 401 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 OR10R2Q8NGX6 335 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 FAM46BQ96A09 425 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 CPNE2Q96FN4 548 aaPredicted RBP5.21□□□□□ -1.58
CHD3-213ENST00000571249 REEP6Q96HR9 211 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 RNF170Q96K19 258 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 TM2D1Q9BX74 207 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 LPAR5Q9H1C0 372 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 KCNK15Q9H427 330 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 NEK6Q9HC98 313 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 ZNF221Q9UK13 617 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 PIGLQ9Y2B2 252 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 MRPS28Q9Y2Q9 187 aaKnown RBP5.21□□□□□ -1.58
CHD3-213ENST00000571249 IGHV4OR15-8A0A075B7B6 117 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 A0A087WW49 117 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 A0A0A6YYD4 124 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 SNRPGP15A8MWD9 76 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 SPRY2O43597 315 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 SULT1A3P0DMM9 295 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 SULT1A4P0DMN0 295 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 PTHLHP12272 177 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 TBPP20226 339 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 RCVRNP35243 200 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 CEACAM3P40198 252 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 CCR6P51684 374 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 TMEM50BP56557 158 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 TAS2R19P59542 299 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 ZP1P60852 638 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 RPS27AP62979 156 aaKnown RBP5.2□□□□□ -1.58
CHD3-213ENST00000571249 ARL6IP1Q15041 203 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 MOGAT2Q3SYC2 334 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 FAM76BQ5HYJ3 339 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 CLVS2Q5SYC1 327 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 AWAT2Q6E213 333 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 OR10K2Q6IF99 312 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 GLIPR1L1Q6UWM5 242 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 MOB3CQ70IA8 216 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 TCF23Q7RTU1 214 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 COMMD2Q86X83 199 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 DEFB125Q8N687 156 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 NHLRC2Q8NBF2 726 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 PXT1Q8NFP0 134 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 OR4C16Q8NGL9 310 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 ZNF596Q8TC21 504 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 OR5P3Q8WZ94 311 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 FYTTD1Q96QD9 318 aaKnown RBP5.2□□□□□ -1.58
CHD3-213ENST00000571249 URM1Q9BTM9 101 aaKnown RBP5.2□□□□□ -1.58
CHD3-213ENST00000571249 FGF23Q9GZV9 251 aaPredicted RBP5.2□□□□□ -1.58
CHD3-213ENST00000571249 CST11Q9H112 138 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 NUDT15Q9NV35 164 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 MCUBQ9NWR8 336 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 SLC2A8Q9NY64 477 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 IL36GQ9NZH8 169 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 MDFICQ9P1T7 246 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 FBXO7Q9Y3I1 522 aa5.2□□□□□ -1.58
CHD3-213ENST00000571249 TRAV6A0A075B6T7 132 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 FAM172BPA6NC97 362 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 C9orf118A6NHY6 69 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 NCBP2LA6PVI3 153 aaKnown RBP5.19□□□□□ -1.58
CHD3-213ENST00000571249 ZNF850A8MQ14 1090 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 LY6LH3BQJ8 138 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 BUB1B-PAK6H3BSN5 160 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 MFNGO00587 321 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 ZNF780AO75290 641 aaPredicted RBP5.19□□□□□ -1.58
CHD3-213ENST00000571249 RGS11O94810 467 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 NDUFB8O95169 186 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 CST4P01036 141 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 IGLV1-47P01700 117 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 C1QBP02746 253 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 ZNF735P0CB33 412 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 HIST1H1DP16402 221 aaKnown RBP5.19□□□□□ -1.58
CHD3-213ENST00000571249 NHLH2Q02577 135 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 PRDX4Q13162 271 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 MEF2DQ14814 521 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 RBMS2Q15434 407 aaKnown RBP5.19□□□□□ -1.58
CHD3-213ENST00000571249 CDNFQ49AH0 187 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 RNASE12Q5GAN4 147 aaKnown RBP5.19□□□□□ -1.58
CHD3-213ENST00000571249 Q5VSD8 79 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 STEAP1BQ6NZ63 245 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 RTN4RL2Q86UN3 420 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 TMEM104Q8NE00 496 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms