RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 H2BFWTQ7Z2G1 175 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 DYNAPQ8N1N2 210 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 C12orf45Q8N5I9 185 aaPredicted RBP5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 SLC35G3Q8N808 338 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR5AN1Q8NGI8 311 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR5R1Q8NH85 324 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 ZNF418Q8TF45 676 aaPredicted RBP5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 MITD1Q8WV92 249 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 C17orf50Q8WW18 174 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 SSMEM1Q8WWF3 244 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 DDB2Q92466 427 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 R3HDM4Q96D70 268 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 SSX3Q99909 188 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 PDCD10Q9BUL8 212 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 MED28Q9H204 178 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR51J1Q9H342 316 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 PLEKHA2Q9HB19 425 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 C1RLQ9NZP8 487 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 CREBBPQ92793 2442 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 A0A0A6YYJ9 748 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 A0A0B4J2A0 478 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 C7orf66A4D0T2 115 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 C5orf51A6NDU8 294 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 NCBP2LA6PVI3 153 aaKnown RBP5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 VGLL3A8MV65 326 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 INAFM1C9JVW0 142 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 NBR2O15453 112 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 PROP1O75360 226 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 SNAPC5O75971 98 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 ACTL6BO94805 426 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 KRASP01116 189 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 IGKV1-16P04430 117 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 HOXB5P09067 269 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 SAA1P0DJI8 122 aaPredicted RBP5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 CD24P25063 80 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 PAX6P26367 422 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 G6PCP35575 357 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 LGALS7P47929 136 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 DYNLT3P51808 116 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 LINC00205P59089 165 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 SUPT4H1P63272 117 aaKnown RBP5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 HABP2Q14520 560 aaPredicted RBP5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 HNF4GQ14541 408 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM177Q53S58 311 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 LDLRAD2Q5SZI1 272 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 WFDC3Q8IUB2 231 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 FAM219AQ8IW50 185 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 SIGLECL1Q8N7X8 197 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR8H1Q8NGG4 311 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 GLYATL2Q8WU03 294 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 CFHR4Q92496 578 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 JMJD8Q96S16 334 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 RNF5Q99942 180 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 SLC25A33Q9BSK2 321 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 RAB18Q9NP72 206 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 TNFRSF19Q9NS68 423 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM140Q9NV12 185 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 METTL1Q9UBP6 276 aaKnown RBP5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 SHPKQ9UHJ6 478 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 VPREB3Q9UKI3 123 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 TCF19Q9Y242 345 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 MOB4Q9Y3A3 225 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMED3Q9Y3Q3 217 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 PDZD2O15018 2839 aa5.29□□□□□ -1.56
CTDNEP1-204ENST00000570484 PRRC2AP48634 2157 aaKnown RBP5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 A0A0B4J293 547 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 C13orf42A0A1B0GVH6 325 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 M0QZK8 103 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 CCSO14618 274 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 SLC25A17O43808 307 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR2F2O95006 317 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR2A4O95047 310 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 CDS2O95674 445 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 IGHV4-59P01825 116 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 SULT1A3P0DMM9 295 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 SULT1A4P0DMN0 295 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 VDAC1P21796 283 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 UBE2KP61086 200 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 RRAS2P62070 204 aaPredicted RBP5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 LY6EQ16553 131 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 ANKRD55Q3KP44 614 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 GSG1LQ6UXU4 331 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 C16orf82Q7Z2V1 217 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM219Q86XT9 240 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 THNSL2Q86YJ6 484 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 VKORC1L1Q8N0U8 176 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 BCL6BQ8N143 479 aaPredicted RBP5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR4A16Q8NH70 328 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR4A5Q8NH83 315 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR1S1Q8NH92 325 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 ABHD5Q8WTS1 349 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 MISP3Q96FF7 219 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM56Q96MV1 263 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR2A7Q96R45 310 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 CLCC1Q96S66 551 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 RASL11BQ9BPW5 248 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 MEGF9Q9H1U4 602 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 MGAT4CQ9UBM8 478 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 CACFD1Q9UGQ2 172 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms