RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 OR4S2Q8NH73 311 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 GIMAP1Q8WWP7 306 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 ALX4Q9H161 411 aaPredicted RBP10.1□□□□□ -0.79
CNOT1-220ENST00000569916 SLA2Q9H6Q3 261 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 EHFQ9NZC4 300 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 TNFSF12O43508 249 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 LGALS1P09382 135 aaKnown RBP10.09□□□□□ -0.79
CNOT1-220ENST00000569916 OR8U8P0C7N1 319 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 TPPP2P59282 170 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 FXYD4P59646 89 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 TNXAQ16473 311 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 GPR141Q7Z602 305 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 TMEM17Q86X19 198 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 VKORC1L1Q8N0U8 176 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 POC5Q8NA72 575 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 ZBTB34Q8NCN2 500 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 MRAPQ8TCY5 172 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 GPX8Q8TED1 209 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 SRSF12Q8WXF0 261 aaKnown RBP10.09□□□□□ -0.79
CNOT1-220ENST00000569916 DPF1Q92782 380 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 MS4A10Q96PG2 267 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 DCUN1D5Q9BTE7 237 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 SLC5A7Q9GZV3 580 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 ZNF430Q9H8G1 570 aaPredicted RBP10.09□□□□□ -0.79
CNOT1-220ENST00000569916 TNCP24821 2201 aa10.09□□□□□ -0.79
CNOT1-220ENST00000569916 SMIM31A0A1B0GVY4 71 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 H3BUA1 57 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 K7EIL1 84 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 TRGV3P03979 118 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 CD40LGP29965 261 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 RFX2P48378 723 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 TAS2R46P59540 309 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 DYRK1AQ13627 763 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 MZT2AQ6P582 158 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 ZNF818PQ6ZRF7 136 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 SNX29P2Q8IUI4 249 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 OR5T1Q8NG75 326 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 AP3S1Q92572 193 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 TMEM68Q96MH6 324 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 SCPEP1Q9HB40 452 aa10.08□□□□□ -0.8
CNOT1-220ENST00000569916 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 A0A087WW49 117 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 MSGN1A6NI15 193 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 CREBL2O60519 120 aaPredicted RBP10.07□□□□□ -0.8
CNOT1-220ENST00000569916 RAMP3O60896 148 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 IGHV3-11P01762 117 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 PMP2P02689 132 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 APELAP0DMC3 54 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 ZNF182P17025 639 aaPredicted RBP10.07□□□□□ -0.8
CNOT1-220ENST00000569916 KIR2DS2P43631 304 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 HERV-K104P61576 105 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 C10orf55Q5SWW7 151 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 DHRS11Q6UWP2 260 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 LYSMD2Q8IV50 215 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 MMD2Q8IY49 270 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 PUSL1Q8N0Z8 303 aaKnown RBP10.07□□□□□ -0.8
CNOT1-220ENST00000569916 OR5H2Q8NGV7 314 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 MOB3AQ96BX8 217 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 RHOVQ96L33 236 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 PHB2Q99623 299 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 ZNF2Q9BSG1 426 aaPredicted RBP10.07□□□□□ -0.8
CNOT1-220ENST00000569916 FXYD6Q9H0Q3 95 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 ZNF355PQ9NSJ1 428 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 ADAM30Q9UKF2 790 aa10.07□□□□□ -0.8
CNOT1-220ENST00000569916 WI2-2373I1.2A0A1W2PRP0 233 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 FAM25AB3EWG3 89 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 FAM25CB3EWG5 89 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 FAM25GB3EWG6 89 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 SEC14L6B5MCN3 397 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 LINC01619G3V211 115 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 SULT1C2O00338 296 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 RBFOX2O43251 390 aaKnown RBP eCLIP10.06□□□□□ -0.83e-8■■□□□ 14
CNOT1-220ENST00000569916 KBTBD11O94819 623 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 OR2A4O95047 310 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 BRI3O95415 125 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 HLA-DMAP28067 261 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 GNRHRP30968 328 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 HRH1P35367 487 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 SLURP1P55000 103 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 DEFA5Q01523 94 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 CATR1Q13166 79 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 SPCS2Q15005 226 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 C9orf66Q5T8R8 295 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 SPAG16Q8N0X2 631 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 ADAD2Q8NCV1 583 aaKnown RBP10.06□□□□□ -0.8
CNOT1-220ENST00000569916 VSTM2AQ8TAG5 236 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 TMEM167AQ8TBQ9 72 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 DCUN1D4Q92564 292 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 OR2A7Q96R45 310 aa10.06□□□□□ -0.8
CNOT1-220ENST00000569916 TINAGL1Q9GZM7 467 aaPredicted RBP10.06□□□□□ -0.8
CNOT1-220ENST00000569916 ACTL6BO94805 426 aa10.05□□□□□ -0.8
CNOT1-220ENST00000569916 HRASP01112 189 aa10.05□□□□□ -0.8
CNOT1-220ENST00000569916 RCVRNP35243 200 aa10.05□□□□□ -0.8
CNOT1-220ENST00000569916 SSX9Q7RTT3 188 aa10.05□□□□□ -0.8
CNOT1-220ENST00000569916 CLVS1Q8IUQ0 354 aaPredicted RBP10.05□□□□□ -0.8
CNOT1-220ENST00000569916 OR51H1Q8NH63 302 aa10.05□□□□□ -0.8
CNOT1-220ENST00000569916 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
CNOT1-220ENST00000569916 BORCS5Q969J3 196 aa10.05□□□□□ -0.8
CNOT1-220ENST00000569916 COA4Q9NYJ1 87 aa10.05□□□□□ -0.8
CNOT1-220ENST00000569916 EXTL2Q9UBQ6 330 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms