RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GABRA2P47869 451 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 ENTPD8Q5MY95 495 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 SLC30A7Q8NEW0 376 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 OR4K5Q8NGD3 323 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 GPR148Q8TDV2 347 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 DNAJC27Q9NZQ0 273 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 WIPI2Q9Y4P8 454 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 RTTNQ86VV8 2226 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 MGAQ8IWI9 3026 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 TRAV30A0A087WSZ9 112 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 HIST1H1CP16403 213 aaKnown RBP5.58□□□□□ -1.52
SMG1-217ENST00000569764 RPL7P18124 248 aaKnown RBP5.58□□□□□ -1.52
SMG1-217ENST00000569764 COL8A1P27658 744 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 FHL1Q13642 323 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 MRPS24Q96EL2 167 aaKnown RBP5.58□□□□□ -1.52
SMG1-217ENST00000569764 C20orf144Q9BQM9 153 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 SLC25A19Q9HC21 320 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 RPS10P5Q9NQ39 176 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 MRPL16Q9NX20 251 aaKnown RBP5.58□□□□□ -1.52
SMG1-217ENST00000569764 PRO0628Q9UI54 55 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 FAM236DA0A1B0GTK5 79 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 UBE2QL1A1L167 161 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 B4DXG7 233 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 CSN3P07498 182 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 OR4A8P0C604 315 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 FAM236CP0DP71 79 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 PSG1P11464 419 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 GABARAPL2P60520 117 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 FAM27E3Q08E93 113 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 SPATA31B1PQ5VZV4 182 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 RASL11AQ6T310 242 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 C5orf24Q7Z6I8 188 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 LRP11Q86VZ4 500 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 OR4F17Q8NGA8 305 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 PFN4Q8NHR9 129 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 BLNKQ8WV28 456 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 H1FXQ92522 213 aaKnown RBP5.57□□□□□ -1.52
SMG1-217ENST00000569764 OR4F4Q96R69 305 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 A0A0G2JLM5 398 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 UNC119BA6NIH7 251 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 TRAF3IP2O43734 574 aaPredicted RBP5.57□□□□□ -1.52
SMG1-217ENST00000569764 FAM20BO75063 409 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 OR5G3P0C626 314 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 RPS4Y1P22090 263 aaKnown RBP5.57□□□□□ -1.52
SMG1-217ENST00000569764 C12orf73Q69YU5 71 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 GSG1LQ6UXU4 331 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 IZUMO1Q8IYV9 350 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 ZNF664Q8N3J9 261 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 C9orf106Q8NAJ2 232 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 OR2T6Q8NHC8 308 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 PBDC1Q9BVG4 233 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 MOB1AQ9H8S9 216 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 ZNF331Q9NQX6 463 aaPredicted RBP5.57□□□□□ -1.52
SMG1-217ENST00000569764 CHCHD2Q9Y6H1 151 aaPredicted RBP5.57□□□□□ -1.52
SMG1-217ENST00000569764 COL27A1Q8IZC6 1860 aaPredicted RBP5.57□□□□□ -1.52
SMG1-217ENST00000569764 PKDREJQ9NTG1 2253 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 ZC3H12DA2A288 527 aaKnown RBP5.57□□□□□ -1.52
SMG1-217ENST00000569764 SH2D1BO14796 132 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 CT45A8P0DMV1 189 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 CT45A9P0DMV2 189 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 RBM39Q14498 530 aaKnown RBP5.57□□□□□ -1.52
SMG1-217ENST00000569764 CT45A2Q5DJT8 189 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 BCL2L15Q5TBC7 163 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 AWAT2Q6E213 333 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 LCN10Q6JVE6 187 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 DHRS11Q6UWP2 260 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 APOOLQ6UXV4 268 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 C8orf86Q6ZUL3 223 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 FAM231DQ6ZW35 169 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 OR4C3Q8NH37 302 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 AKAP13Q12802 2813 aa5.57□□□□□ -1.52
SMG1-217ENST00000569764 ZNF705FA8MVS1 300 aaPredicted RBP5.56□□□□□ -1.52
SMG1-217ENST00000569764 MLNRO43193 412 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 NMBP08949 121 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 ZNF705DP0CH99 300 aaPredicted RBP5.56□□□□□ -1.52
SMG1-217ENST00000569764 ZNF705BP0CI00 300 aaPredicted RBP5.56□□□□□ -1.52
SMG1-217ENST00000569764 CRYBB2P43320 205 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 HCCSP53701 268 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 DLX6P56179 175 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 GGNBP1Q5YKI7 109 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 FAM90A2PQ658T7 463 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 MMD2Q8IY49 270 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 TCEANCQ8N8B7 351 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 ZNF615Q8N8J6 731 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 ZFP41Q8N8Y5 198 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 OR51A4Q8NGJ6 313 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 CCL17Q92583 94 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 MEPEQ9NQ76 525 aaPredicted RBP5.56□□□□□ -1.52
SMG1-217ENST00000569764 EXPH5Q8NEV8 1989 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 IGLV3-32A0A0A0MS00 114 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 J3QR89 54 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 CREBL2O60519 120 aaPredicted RBP5.56□□□□□ -1.52
SMG1-217ENST00000569764 NUDT3O95989 172 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 SSX1Q16384 188 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 IQCJQ1A5X6 159 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 PYDC2Q56P42 97 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 OR1L8Q8NGR8 309 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 SSMEM1Q8WWF3 244 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 SYT3Q9BQG1 590 aa5.56□□□□□ -1.52
SMG1-217ENST00000569764 PSMG3Q9BT73 122 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms