RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 MAP2K4P45985 399 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 GBX2P52951 348 aaPredicted RBP4.3□□□□□ -1.72
CDH13-212ENST00000569144 MFAP2P55001 183 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 SSBP2P81877 361 aaPredicted RBP4.3□□□□□ -1.72
CDH13-212ENST00000569144 HTD2P86397 168 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 EXOSC2Q13868 293 aaKnown RBP4.3□□□□□ -1.72
CDH13-212ENST00000569144 FAM209BQ5JX69 171 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 LY6G6FQ5SQ64 297 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 ATAD3CQ5T2N8 411 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 OR2G6Q5TZ20 316 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 ZNF554Q86TJ5 538 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 SERPINA12Q8IW75 414 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 C8orf59Q8N0T1 100 aaPredicted RBP4.3□□□□□ -1.72
CDH13-212ENST00000569144 GAPTQ8N292 157 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 PARP16Q8N5Y8 322 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 OR52L2PQ8NGH6 319 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 OR5D14Q8NGL3 314 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 OR1L6Q8NGR2 347 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 OR4K15Q8NH41 348 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 OR52N1Q8NH53 320 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 OR5AK2Q8NH90 309 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 CACNG8Q8WXS5 425 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 GGHQ92820 318 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 YPEL2Q96QA6 119 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 GPER1Q99527 375 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 TSNAXQ99598 290 aaKnown RBP4.3□□□□□ -1.72
CDH13-212ENST00000569144 PDCD1LG2Q9BQ51 273 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 SULT4A1Q9BR01 284 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 FAM192AQ9GZU8 254 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 IFI27L2Q9H2X8 130 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 SCRT2Q9NQ03 307 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 HEYLQ9NQ87 328 aaPredicted RBP4.3□□□□□ -1.72
CDH13-212ENST00000569144 PLCXD1Q9NUJ7 323 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 FKBP14Q9NWM8 211 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 COA4Q9NYJ1 87 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 IL36GQ9NZH8 169 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 PIPOXQ9P0Z9 390 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 MLXQ9UH92 298 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 CLEC2DQ9UHP7 191 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 ZNF230Q9UIE0 474 aaPredicted RBP4.3□□□□□ -1.72
CDH13-212ENST00000569144 PSORS1C1Q9UIG5 152 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 ING4Q9UNL4 249 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 EXOSC1Q9Y3B2 195 aaKnown RBP4.3□□□□□ -1.72
CDH13-212ENST00000569144 WASHC3Q9Y3C0 194 aa4.3□□□□□ -1.72
CDH13-212ENST00000569144 IGHV4-4A0A075B6R2 117 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 TRAV25A0A0B4J276 109 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 EFCAB10A6NFE3 127 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 ERICH4A6NGS2 130 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 CGB1A6NKQ9 187 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 FAM223BA6NKX1 122 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 FAM90A23PA8MXZ1 464 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 C16orf90A8MZG2 172 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 H7C2Y5 167 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 RAB29O14966 203 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 OGG1O15527 345 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 RPSAP08865 295 aaKnown RBP4.29□□□□□ -1.72
CDH13-212ENST00000569144 P0DMU3 169 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 FAM231AP0DMU4 169 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 FAM231CP0DMU5 169 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 RCC1P18754 421 aaPredicted RBP4.29□□□□□ -1.72
CDH13-212ENST00000569144 MYL12AP19105 171 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 FCGR2BP31994 310 aaPredicted RBP4.29□□□□□ -1.72
CDH13-212ENST00000569144 AQP4P55087 323 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 ST3GAL4Q11206 333 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 RBMY1FQ15415 496 aaKnown RBP4.29□□□□□ -1.72
CDH13-212ENST00000569144 CCDC58Q4VC31 144 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 C6orf141Q5SZD1 244 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 PVRIGQ6DKI7 326 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 DMKNQ6E0U4 476 aaPredicted RBP4.29□□□□□ -1.72
CDH13-212ENST00000569144 RPL22L1Q6P5R6 122 aaKnown RBP4.29□□□□□ -1.72
CDH13-212ENST00000569144 GLDNQ6ZMI3 551 aaPredicted RBP4.29□□□□□ -1.72
CDH13-212ENST00000569144 TMPRSS11AQ6ZMR5 421 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 NR2C2APQ86WQ0 139 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 FAM223AQ8IWN6 122 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 SLC38A6Q8IZM9 456 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 OR2C3Q8N628 320 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 OR2AK2Q8NG84 335 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 OR51A2Q8NGJ7 313 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 OR13C5Q8NGS8 318 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 KCNG3Q8TAE7 436 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 SMIM19Q96E16 107 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 TMEM80Q96HE8 168 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 PGLYRP3Q96LB9 341 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 RARRES2Q99969 163 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 METTL9Q9H1A3 318 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 VCXQ9H320 206 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 MAP6D1Q9H9H5 199 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 TAF9BQ9HBM6 251 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 SPACA1Q9HBV2 294 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 BABAM2Q9NXR7 383 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 MGAT4CQ9UBM8 478 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 STEAP1Q9UHE8 339 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 SELENOKQ9Y6D0 94 aa4.29□□□□□ -1.72
CDH13-212ENST00000569144 TRBV9A0A0B4J1U6 114 aa4.28□□□□□ -1.72
CDH13-212ENST00000569144 TRBV5-5A0A0J9YX44 114 aa4.28□□□□□ -1.72
CDH13-212ENST00000569144 TMEM213A2RRL7 107 aa4.28□□□□□ -1.72
CDH13-212ENST00000569144 A8MWP6 167 aa4.28□□□□□ -1.72
CDH13-212ENST00000569144 MCRIP1C9JLW8 97 aa4.28□□□□□ -1.72
CDH13-212ENST00000569144 GGCTO75223 188 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms