RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 PLEKHA2Q9HB19 425 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 C2CD3Q4AC94 2353 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 TEX13DA0A0J9YY54 714 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-224ENST00000568877 H0Y980 276 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 S1PR2O95136 353 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 NDUFB6O95139 128 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 CRYGBP07316 175 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 LPAR6P43657 344 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 TAS2R31P59538 309 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 ARSJQ5FYB0 599 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-224ENST00000568877 TEX45Q8NA69 505 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 TMEM230Q96A57 120 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 TP53RKQ96S44 253 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 AIFM2Q9BRQ8 373 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 NAA60Q9H7X0 242 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 BEX1Q9HBH7 125 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 COMMD9Q9P000 198 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 SIGLEC9Q9Y336 463 aa13.27□□□□□ -0.29
COMMD4-224ENST00000568877 CLPSL1A2RUU4 121 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 CRYM-AS1A6NIL9 109 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 HLA-DRB1P01911 266 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 SERPINE2P07093 398 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 NQO2P16083 231 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 AKR1C4P17516 323 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 MDKP21741 143 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-224ENST00000568877 KRTAP21-3Q3LHN1 58 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 MZT2BQ6NZ67 158 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 TMED4Q7Z7H5 227 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 PPP1R27Q86WC6 154 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 SGPP2Q8IWX5 399 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 VKORC1L1Q8N0U8 176 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 RHOVQ96L33 236 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 CLCC1Q96S66 551 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 TPSG1Q9NRR2 321 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 MMP24Q9Y5R2 645 aa13.26□□□□□ -0.29
COMMD4-224ENST00000568877 A0A1B0GUS0 222 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 FCN1O00602 326 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 IGHG2P01859 326 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 SAA1P0DJI8 122 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-224ENST00000568877 SLC6A1P30531 599 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 POU2AF1Q16633 256 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 SP6Q3SY56 376 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 SLC35E3Q7Z769 313 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 VSTM2AQ8TAG5 236 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 R3HDM4Q96D70 268 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 HSPB9Q9BQS6 159 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 SERTAD4Q9NUC0 356 aa13.25□□□□□ -0.29
COMMD4-224ENST00000568877 IGHV7-81A0A0B4J1V7 117 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 FAM240BA0A1B0GVZ2 78 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 LINC01548A6NM66 108 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 KCNAB3O43448 404 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 OR2A4O95047 310 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 OR5AC1P0C628 307 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 RPA2P15927 270 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 UCP1P25874 307 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 VDAC2P45880 294 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-224ENST00000568877 COMPP49747 757 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-224ENST00000568877 TMEM95Q3KNT9 176 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 AWAT1Q58HT5 328 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 SSX9Q7RTT3 188 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 PUSL1Q8N0Z8 303 aaKnown RBP13.24□□□□□ -0.29
COMMD4-224ENST00000568877 CENPSQ8N2Z9 138 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 DMBX1Q8NFW5 382 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 OR2A7Q96R45 310 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 MDFIQ99750 246 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 FLVCR2Q9UPI3 526 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 KCNIP3Q9Y2W7 256 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 RNF114Q9Y508 228 aa13.24□□□□□ -0.29
COMMD4-224ENST00000568877 CA2P00918 260 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 KRASP01116 189 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 IGKV1-39P01597 117 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 IGKV1D-39P04432 117 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 TCRBP04435 133 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 DEFA1P59665 94 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 DEFA3P59666 94 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 ERVK-16P61578 105 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 CX3CL1P78423 397 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 DHODHQ02127 395 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 PJVKQ0ZLH3 352 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 PRSS8Q16651 343 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 TRIM16LQ309B1 348 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 TMEM128Q5BJH2 165 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 OR4A47Q6IF82 309 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 ZNF562Q6V9R5 426 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 SLC25A42Q86VD7 318 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 TMEM167AQ8TBQ9 72 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 GLYATL2Q8WU03 294 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 GALNT14Q96FL9 552 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 TMEM222Q9H0R3 208 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 OR51J1Q9H342 316 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 ATRQ13535 2644 aa13.23□□□□□ -0.29
COMMD4-224ENST00000568877 MARCH11A6NNE9 402 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 ARPC1BO15143 372 aaKnown RBP13.22□□□□□ -0.29
COMMD4-224ENST00000568877 CREBL2O60519 120 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-224ENST00000568877 KBTBD11O94819 623 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 G6PCP35575 357 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 PROK1P58294 105 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 SUPT4H1P63272 117 aaKnown RBP13.22□□□□□ -0.29
COMMD4-224ENST00000568877 MRGPRG-AS1Q2M3A8 158 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms