RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PSMB8P28062 276 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 OR3A3P47888 321 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 RFX2P48378 723 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 SLURP1P55000 103 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 DEFA1P59665 94 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 DEFA3P59666 94 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 GNB1P62873 340 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 MEF2CQ06413 473 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-216ENST00000567071 ASAH1Q13510 395 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 GNMTQ14749 295 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 CDK10Q15131 360 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 ACTBL2Q562R1 376 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 TPTE2P1Q5T6R2 138 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 PRAMEF5Q5TYX0 476 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 TRAT1Q6PIZ9 186 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 Q6ZS49 121 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 HAPLN4Q86UW8 402 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 Q8N1X5 172 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 POC5Q8NA72 575 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 OR5AP2Q8NGF4 316 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 OR56B4Q8NH76 319 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 ARL11Q969Q4 196 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 C11orf54Q9H0W9 315 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-216ENST00000567071 GNB4Q9HAV0 340 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 HRASLSQ9HDD0 168 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 ZNF107Q9UII5 783 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-216ENST00000567071 MGAT4AQ9UM21 535 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 LINC00312Q9Y6C7 94 aa7.41□□□□□ -1.22
CAPN3-216ENST00000567071 ZNF729A6NN14 1252 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-216ENST00000567071 SPINT2O43291 252 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 CD74P04233 296 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 TBPP20226 339 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 BTCP35070 178 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 FAUP35544 74 aaKnown RBP7.4□□□□□ -1.22
CAPN3-216ENST00000567071 CCR6P51684 374 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 DYRK1AQ13627 763 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 MEF2DQ14814 521 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 C17orf58Q2M2W7 97 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 SCGB2B2Q4G0G5 96 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 FAM53AQ6NSI3 398 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-216ENST00000567071 ZNF565Q8N9K5 539 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 OR10V1Q8NGI7 309 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 OR51S1Q8NGJ8 323 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 OR4A4PQ8NGN8 299 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 RPEQ96AT9 228 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 GINS4Q9BRT9 223 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 GAL3ST2Q9H3Q3 398 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 NCOR1P1Q9H4R4 102 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 OR1A1Q9P1Q5 309 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 SLC23A1Q9UHI7 598 aa7.4□□□□□ -1.22
CAPN3-216ENST00000567071 UBE2J1Q9Y385 318 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-216ENST00000567071 KBTBD11-OT1A0A1B0GTJ5 212 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 NCBP2LA6PVI3 153 aaKnown RBP7.39□□□□□ -1.23
CAPN3-216ENST00000567071 CENPXA8MT69 81 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 DISC1C4P0D8 188 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 MMP23AO75900 390 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 ZNF735P0CB33 412 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 RBMY1A1P0DJD3 496 aaKnown RBP7.39□□□□□ -1.23
CAPN3-216ENST00000567071 CGB3P0DN86 165 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 CGB7P0DN87 165 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 GZMHP20718 246 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 NFYAP23511 347 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-216ENST00000567071 NFYBP25208 207 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 PPP1CCP36873 323 aaKnown RBP7.39□□□□□ -1.23
CAPN3-216ENST00000567071 PRRX1P54821 245 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 TSPAN5P62079 268 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 HNF4GQ14541 408 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 MZT2BQ6NZ67 158 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 ZNF491Q8N8L2 437 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 OR52L2PQ8NGH6 319 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 OR10J5Q8NHC4 309 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 ENKURQ8TC29 256 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 PHLDA1Q8WV24 401 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-216ENST00000567071 CORO2AQ92828 525 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 LEAP2Q969E1 77 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 TOMM40LQ969M1 308 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 C7orf50Q9BRJ6 194 aaKnown RBP7.39□□□□□ -1.23
CAPN3-216ENST00000567071 CABLES2Q9BTV7 478 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 PARP12Q9H0J9 701 aaKnown RBP7.39□□□□□ -1.23
CAPN3-216ENST00000567071 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 LIN7CQ9NUP9 197 aaKnown RBP7.39□□□□□ -1.23
CAPN3-216ENST00000567071 IDI2-AS1Q9NZ38 188 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 GNG12Q9UBI6 72 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 DNAH17Q9UFH2 4485 aa7.39□□□□□ -1.23
CAPN3-216ENST00000567071 PKD1P98161 4303 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 TRBV6-7A0A0A0MS04 114 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 A0A0J9YWU9 116 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 FAM240BA0A1B0GVZ2 78 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 NAP1L6A6NFF2 107 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 LINC01548A6NM66 108 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 FAM90A9PA6NNJ1 464 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 NPIPB11E5RHQ5 1161 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 BUB1B-PAK6H3BSN5 160 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 IGHV3-7P01780 117 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 AADACP22760 399 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 FCGR2CP31995 323 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 FXYD4P59646 89 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 HERV-K104P61576 105 aa7.38□□□□□ -1.23
CAPN3-216ENST00000567071 RGS21Q2M5E4 152 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms