RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 OR4C46A6NHA9 309 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 SAC3D1A6NKF1 404 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 NPIPB5A8MRT5 1133 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 ALPLP05186 524 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 TPBGQ13641 420 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 OR2G6Q5TZ20 316 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 CEACAM19Q7Z692 300 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 MMD2Q8IY49 270 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 SETD9Q8NE22 299 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 OSR1Q8TAX0 266 aaPredicted RBP12.31□□□□□ -0.44
CDH3-205ENST00000566808 CD300LFQ8TDQ1 290 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 CSTL1Q9H114 145 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 C12orf4Q9NQ89 552 aa12.31□□□□□ -0.44
CDH3-205ENST00000566808 RPL36Q9Y3U8 105 aaKnown RBP12.31□□□□□ -0.44
CDH3-205ENST00000566808 IGHV4-4A0A075B6R2 117 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 IGKV1-6A0A0C4DH72 117 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 A0A1W2PPK0 400 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 CRYZL1O95825 349 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 HTR2CP28335 458 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 ADMP35318 185 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 CDK10Q15131 360 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 NR2C2APQ86WQ0 139 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 OR5B3Q8NH48 314 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 PGLYRP3Q96LB9 341 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 NICN1Q9BSH3 213 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
CDH3-205ENST00000566808 TM2D1Q9BX74 207 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 PLEKHJ1Q9NW61 149 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 AK3Q9UIJ7 227 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 S4R3C0 116 aa12.3□□□□□ -0.44
CDH3-205ENST00000566808 DPPA5A6NC42 116 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 SAA1P0DJI8 122 aaPredicted RBP12.29□□□□□ -0.44
CDH3-205ENST00000566808 SRMP19623 302 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 PSMB6P28072 239 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 SERPINB10P48595 397 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 ETV1P50549 477 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 LAMTOR1Q6IAA8 161 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 OR10K2Q6IF99 312 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 C19orf35Q6ZS72 473 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 MAPKAPK5-AS1Q8N8E1 139 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 ADTRPQ96IZ2 230 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 FANCD2OSQ96PS1 177 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 DERL3Q96Q80 235 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 Q9N2K0 584 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 FGF20Q9NP95 211 aaPredicted RBP12.29□□□□□ -0.44
CDH3-205ENST00000566808 BABAM2Q9NXR7 383 aa12.29□□□□□ -0.44
CDH3-205ENST00000566808 TRBV7-1A0A0A6YYK4 115 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 HMX3A6NHT5 357 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 DEFB4AO15263 64 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 CDK2AP2O75956 126 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 DHFRP00374 187 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 LALBAP00709 142 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 MED21Q13503 144 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 PVRIGQ6DKI7 326 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 POM121L12Q8N7R1 296 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 OR4A5Q8NH83 315 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 RHOXF1Q8NHV9 184 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 GGHQ92820 318 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 C5orf30Q96GV9 206 aa12.28□□□□□ -0.44
CDH3-205ENST00000566808 P0DMU3 169 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 FAM231AP0DMU4 169 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 FAM231CP0DMU5 169 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 KLK9Q2XQG4 91 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 LGALS9BQ3B8N2 356 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 ZIK1Q3SY52 487 aaPredicted RBP12.27□□□□□ -0.45
CDH3-205ENST00000566808 CCDC197Q8NCU1 140 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 TMEM190Q8WZ59 177 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 CXorf58Q96LI9 332 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 FYTTD1Q96QD9 318 aaKnown RBP12.27□□□□□ -0.45
CDH3-205ENST00000566808 RNF126Q9BV68 326 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 KLK9Q9UKQ9 250 aa12.27□□□□□ -0.45
CDH3-205ENST00000566808 TRAV10A0A0B4J240 114 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 M0R2N4 97 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 EI24O14681 340 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 AMBPP02760 352 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 CLEC3BP05452 202 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 HIST1H1BP16401 226 aaKnown RBP12.26□□□□□ -0.45
CDH3-205ENST00000566808 DCKP27707 260 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 UNC119Q13432 240 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 TTC23Q5W5X9 447 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 APRG1Q8IVJ8 170 aa12.26□□□□□ -0.45
CDH3-205ENST00000566808 DAZ1Q9NQZ3 744 aaKnown RBP12.26□□□□□ -0.45
CDH3-205ENST00000566808 MFSD2BA6NFX1 497 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 TRDCB7Z8K6 153 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 CRYGCP07315 174 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 GPR183P32249 361 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 DUTP33316 252 aaKnown RBP12.25□□□□□ -0.45
CDH3-205ENST00000566808 RPL27AP46776 148 aaKnown RBP12.25□□□□□ -0.45
CDH3-205ENST00000566808 ZNF645Q8N7E2 425 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 ZFP41Q8N8Y5 198 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 Q8NAQ8 132 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 OR4A4PQ8NGN8 299 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 ZNF436Q9C0F3 470 aaPredicted RBP12.25□□□□□ -0.45
CDH3-205ENST00000566808 SLC2A9Q9NRM0 540 aa12.25□□□□□ -0.45
CDH3-205ENST00000566808 A0A0A6YYD4 124 aa12.24□□□□□ -0.45
CDH3-205ENST00000566808 IGHV3-35A0A0C4DH35 117 aa12.24□□□□□ -0.45
CDH3-205ENST00000566808 CA1P00915 261 aaPredicted RBP12.24□□□□□ -0.45
CDH3-205ENST00000566808 MYL12AP19105 171 aa12.24□□□□□ -0.45
CDH3-205ENST00000566808 MAPK3P27361 379 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms