RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 TIMM50Q3ZCQ8 353 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 ASPHD1Q5U4P2 390 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 C11orf87Q6NUJ2 197 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 ZNF562Q6V9R5 426 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 HAPLN4Q86UW8 402 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 GVQW1Q8N7I0 195 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 TCTEX1D1Q8N7M0 179 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 BEST4Q8NFU0 473 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 TSPAN14Q8NG11 270 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 MYOZ3Q8TDC0 251 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 SECTM1Q8WVN6 248 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 DCUN1D4Q92564 292 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 ADTRPQ96IZ2 230 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 GPHA2Q96T91 129 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 RNF5Q99942 180 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 IFT46Q9NQC8 304 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 TAS2R8Q9NYW2 309 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 ETV7Q9Y603 341 aa7.84□□□□□ -1.15
GTF3C1-206ENST00000566779 A0A087WXM4 84 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 I3L521 148 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 TNFSF12O43508 249 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 ACTL6BO94805 426 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 TNFAIP8O95379 198 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 RRASP10301 218 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 DUTP33316 252 aaKnown RBP7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 LGALS7P47929 136 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 FHL3Q13643 280 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 C19orf54Q5BKX5 351 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 PYHIN1Q6K0P9 492 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 TMEM17Q86X19 198 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 VKORC1L1Q8N0U8 176 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 ZNF645Q8N7E2 425 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 SAMD12Q8N8I0 201 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 POC5Q8NA72 575 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 TOLLIPQ9H0E2 274 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 DIABLOQ9NR28 239 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 ANXA10Q9UJ72 324 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 MRPS7Q9Y2R9 242 aaKnown RBP7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 PRELID3BQ9Y3B1 194 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 OR2W1Q9Y3N9 320 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 NUBP2Q9Y5Y2 271 aa7.83□□□□□ -1.16
GTF3C1-206ENST00000566779 SRRM4A7MD48 611 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 DIRAS3O95661 229 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 CTXN2P0C2S0 81 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 SAA1P0DJI8 122 aaPredicted RBP7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 AADACP22760 399 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 FCGR2CP31995 323 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 CRIP2P52943 208 aaPredicted RBP7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 KIAA0141Q14154 515 aaPredicted RBP7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 AKIRIN2Q53H80 203 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 C10orf55Q5SWW7 151 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 CNIH2Q6PI25 160 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 Q6ZS49 121 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 SSX9Q7RTT3 188 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 CLRN3Q8NCR9 226 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 OR13F1Q8NGS4 319 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 DLX4Q92988 240 aaPredicted RBP7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 DCSTAMPQ9H295 470 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 ZMAT5Q9UDW3 170 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 RBMX2Q9Y388 322 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 X6R8D5 127 aa7.82□□□□□ -1.16
GTF3C1-206ENST00000566779 MSGN1A6NI15 193 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 RAMP3O60896 148 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 PRH1P02810 166 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 UBE2KP61086 200 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 RPL30P62888 115 aaKnown RBP7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 SSBP2P81877 361 aaPredicted RBP7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 RUNX1Q01196 453 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 SRSF7Q16629 238 aaKnown RBP eCLIP7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 PRSS8Q16651 343 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 RNASE12Q5GAN4 147 aaKnown RBP7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 UBE2NLQ5JXB2 153 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 TMEM69Q5SWH9 247 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 OR4S2Q8NH73 311 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 SRSF12Q8WXF0 261 aaKnown RBP7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 DDB2Q92466 427 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 FYTTD1Q96QD9 318 aaKnown RBP7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 ASCL2Q99929 193 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 SLC5A7Q9GZV3 580 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 SLA2Q9H6Q3 261 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 AUNIPQ9H7T9 357 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 ZNF430Q9H8G1 570 aaPredicted RBP7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 CCL28Q9NRJ3 127 aa7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 ZNF256Q9Y2P7 627 aaPredicted RBP7.81□□□□□ -1.16
GTF3C1-206ENST00000566779 DPPA5A6NC42 116 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 CREBL2O60519 120 aaPredicted RBP7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 HLA-DQB1P01920 261 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 HSPB1P04792 205 aaKnown RBP7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 CRYGBP07316 175 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 RPA2P15927 270 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 RPS19P39019 145 aaKnown RBP7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 HERV-K104P61576 105 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 NCS1P62166 190 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 DCTN2Q13561 401 aaKnown RBP7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 CDK10Q15131 360 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 HOGA1Q86XE5 327 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 OR51H1Q8NH63 302 aa7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 OSR1Q8TAX0 266 aaPredicted RBP7.8□□□□□ -1.16
GTF3C1-206ENST00000566779 YIPF6Q96EC8 236 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms