RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PRELID3BQ9Y3B1 194 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 OR2W1Q9Y3N9 320 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 STAB2Q8WWQ8 2551 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 HUWE1Q7Z6Z7 4374 aaKnown RBP11.38□□□□□ -0.59
RNF40-209ENST00000566703 A0A075B6Q4 140 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.38□□□□□ -0.59
RNF40-209ENST00000566703 ANKRD65E5RJM6 399 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 RBMXL2O75526 392 aaKnown RBP11.38□□□□□ -0.59
RNF40-209ENST00000566703 TUSC2O75896 110 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 HLA-DQB1P01920 261 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 HSPA13P48723 471 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 CDNFQ49AH0 187 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 NECAP1Q8NC96 275 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 ACOT12Q8WYK0 555 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 KCTD12Q96CX2 325 aaKnown RBP11.38□□□□□ -0.59
RNF40-209ENST00000566703 DCUN1D5Q9BTE7 237 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 ZNF430Q9H8G1 570 aaPredicted RBP11.38□□□□□ -0.59
RNF40-209ENST00000566703 ADAM30Q9UKF2 790 aa11.38□□□□□ -0.59
RNF40-209ENST00000566703 IGKV1D-8A0A087WSZ0 117 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 BMPR1BO00238 502 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 MRPS14O60783 128 aaKnown RBP11.37□□□□□ -0.59
RNF40-209ENST00000566703 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
RNF40-209ENST00000566703 APELAP0DMC3 54 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 CD36P16671 472 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 ZNF45Q02386 682 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 HACD4Q5VWC8 232 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 ZFAND6Q6FIF0 208 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 LINC00322Q6ZN03 302 aaPredicted RBP11.37□□□□□ -0.59
RNF40-209ENST00000566703 IDO2Q6ZQW0 420 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 VSTM2AQ8TAG5 236 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 OR51E2Q9H255 320 aa11.37□□□□□ -0.59
RNF40-209ENST00000566703 MRPS7Q9Y2R9 242 aaKnown RBP11.37□□□□□ -0.59
RNF40-209ENST00000566703 RBMX2Q9Y388 322 aaKnown RBP11.37□□□□□ -0.59
RNF40-209ENST00000566703 IZUMO1RA6ND01 250 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 FCGR3BO75015 233 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 SCGNO76038 276 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 MAS1LP35410 378 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 DEFA5Q01523 94 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 EXOSC2Q13868 293 aaKnown RBP11.36□□□□□ -0.59
RNF40-209ENST00000566703 CNIH2Q6PI25 160 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 KCTD9Q7L273 389 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 IL17DQ8TAD2 202 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 HSD17B10Q99714 261 aaKnown RBP11.36□□□□□ -0.59
RNF40-209ENST00000566703 ST6GALNAC5Q9BVH7 336 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 ZNF257Q9Y2Q1 563 aa11.36□□□□□ -0.59
RNF40-209ENST00000566703 ZNF785A8K8V0 405 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 NOTOA8MTQ0 251 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 GGCTO75223 188 aaKnown RBP11.35□□□□□ -0.59
RNF40-209ENST00000566703 PRH1P02810 166 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 FGF9P31371 208 aaPredicted RBP11.35□□□□□ -0.59
RNF40-209ENST00000566703 DEFB114Q30KQ6 69 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 C22orf42Q6IC83 251 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 TPRA1Q86W33 373 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 NR2C2APQ86WQ0 139 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 OR2A7Q96R45 310 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 SLC2A8Q9NY64 477 aa11.35□□□□□ -0.59
RNF40-209ENST00000566703 TECRQ9NZ01 308 aaKnown RBP11.35□□□□□ -0.59
RNF40-209ENST00000566703 ELF5Q9UKW6 265 aaPredicted RBP11.35□□□□□ -0.59
RNF40-209ENST00000566703 NPIPB5A8MRT5 1133 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 J3QRK9 145 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 LGALS9O00182 355 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 TPPPO94811 219 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 IGLV2-14P01704 120 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 NFYAP23511 347 aaPredicted RBP11.34□□□□□ -0.59
RNF40-209ENST00000566703 KIR2DS2P43631 304 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 RPL30P62888 115 aaKnown RBP11.34□□□□□ -0.59
RNF40-209ENST00000566703 KLK9Q2XQG4 91 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 C15orf32Q32M92 178 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 CD300EQ496F6 205 aaPredicted RBP11.34□□□□□ -0.59
RNF40-209ENST00000566703 ZNF66Q6ZN08 573 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 PUSL1Q8N0Z8 303 aaKnown RBP11.34□□□□□ -0.59
RNF40-209ENST00000566703 OR4S2Q8NH73 311 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 TMEM167AQ8TBQ9 72 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 CNBD2Q96M20 576 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 NEURL2Q9BR09 285 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 AIFM2Q9BRQ8 373 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 SLC2A9Q9NRM0 540 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 KLK9Q9UKQ9 250 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 DMRT1Q9Y5R6 373 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 CEPT1Q9Y6K0 416 aa11.34□□□□□ -0.59
RNF40-209ENST00000566703 TEX22C9J3V5 150 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 OR2J3O76001 311 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 CRYGCP07315 174 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 RPL27AP46776 148 aaKnown RBP11.33□□□□□ -0.6
RNF40-209ENST00000566703 CD81P60033 236 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 GABARAPL2P60520 117 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 EIF4EBP1Q13541 118 aaPredicted RBP11.33□□□□□ -0.6
RNF40-209ENST00000566703 IZUMO2Q6UXV1 221 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 MFSD4AQ8N468 514 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 DYNLRB2Q8TF09 96 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 HIPK2Q9H2X6 1198 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 ZC4H2Q9NQZ6 224 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 ANXA10Q9UJ72 324 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 FBXL7Q9UJT9 491 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 RAB26Q9ULW5 256 aa11.33□□□□□ -0.6
RNF40-209ENST00000566703 TNCP24821 2201 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 TENM2Q9NT68 2774 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 IGKV1D-13A0A0B4J2D9 117 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms