RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 LIN54Q6MZP7 749 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 DHRS11Q6UWP2 260 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 FAM131AQ6UXB0 335 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 HAPLN4Q86UW8 402 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 PDPNQ86YL7 162 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 ZNF645Q8N7E2 425 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 ZNF383Q8NA42 475 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 DRAXINQ8NBI3 349 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-214ENST00000566230 GPX8Q8TED1 209 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 CASTOR1Q8WTX7 329 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 FLYWCH2Q96CP2 140 aaKnown RBP10.28□□□□□ -0.76
COMMD4-214ENST00000566230 KIAA1456Q9P272 454 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 RABL2AQ9UBK7 228 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-214ENST00000566230 ADAM30Q9UKF2 790 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 ANAPC10Q9UM13 185 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 RABL2BQ9UNT1 228 aa10.28□□□□□ -0.76
COMMD4-214ENST00000566230 H3BMQ9 156 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 NBR2O15453 112 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 RGS5O15539 181 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 NDUFA3O95167 84 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 LGALS1P09382 135 aaKnown RBP10.27□□□□□ -0.77
COMMD4-214ENST00000566230 FCGR2CP31995 323 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 LGALS7P47929 136 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 TAS2R46P59540 309 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 NDPQ00604 133 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 CDK10Q15131 360 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 MSMO1Q15800 293 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 C5orf64Q2M2E5 130 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 GLDNQ6ZMI3 551 aaPredicted RBP10.27□□□□□ -0.77
COMMD4-214ENST00000566230 LYSMD2Q8IV50 215 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 ZBTB34Q8NCN2 500 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 SNAPC3Q92966 411 aa10.27□□□□□ -0.77
COMMD4-214ENST00000566230 TSNAXQ99598 290 aaKnown RBP10.27□□□□□ -0.77
COMMD4-214ENST00000566230 CCDC59Q9P031 241 aaKnown RBP10.27□□□□□ -0.77
COMMD4-214ENST00000566230 ALMS1Q8TCU4 4167 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 ZNF701M0R085 212 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-214ENST00000566230 CTDSP2O14595 271 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 DUTP33316 252 aaKnown RBP10.26□□□□□ -0.77
COMMD4-214ENST00000566230 CRIP2P52943 208 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-214ENST00000566230 RPS16P62249 146 aaKnown RBP10.26□□□□□ -0.77
COMMD4-214ENST00000566230 CBX3Q13185 183 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 DYRK1AQ13627 763 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 RTL8BQ17RB0 113 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 BORCS5Q969J3 196 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 OR4C12Q96R67 309 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 SLC35D1Q9NTN3 355 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 EXTL2Q9UBQ6 330 aa10.26□□□□□ -0.77
COMMD4-214ENST00000566230 A0A1W2PN81 502 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 MEIS3P1A6NDR6 274 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 CCDC160A6NGH7 325 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 J3QRK9 145 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 RRHO14718 337 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 IGLV1-51P01701 117 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 EGR2P11161 476 aaPredicted RBP10.25□□□□□ -0.77
COMMD4-214ENST00000566230 CHRNA7P36544 502 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 LINC00205P59089 165 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 HAGHQ16775 308 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 ECSCRQ19T08 205 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 TMEM177Q53S58 311 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 ZNF660Q6AZW8 331 aaPredicted RBP10.25□□□□□ -0.77
COMMD4-214ENST00000566230 ZNF66Q6ZN08 573 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 SNX29P2Q8IUI4 249 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 OR5H2Q8NGV7 314 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 HSD17B10Q99714 261 aaKnown RBP10.25□□□□□ -0.77
COMMD4-214ENST00000566230 SPATA25Q9BR10 227 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 FOXA2Q9Y261 457 aaPredicted RBP10.25□□□□□ -0.77
COMMD4-214ENST00000566230 RBMX2Q9Y388 322 aaKnown RBP10.25□□□□□ -0.77
COMMD4-214ENST00000566230 PRELID3BQ9Y3B1 194 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 NUBP2Q9Y5Y2 271 aa10.25□□□□□ -0.77
COMMD4-214ENST00000566230 IGKV1D-13A0A0B4J2D9 117 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 SPDEFO95238 335 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 PPYP01298 95 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 IGLV2-14P01704 120 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 IGHV3-11P01762 117 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 IGKV1-16P04430 117 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 HSPB1P04792 205 aaKnown RBP10.24□□□□□ -0.77
COMMD4-214ENST00000566230 FCER2P06734 321 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 IGKV1-13P0DP09 117 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 AADACP22760 399 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 RFX2P48378 723 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 MRPS10P82664 201 aaKnown RBP10.24□□□□□ -0.77
COMMD4-214ENST00000566230 PSG5Q15238 335 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 BVESQ8NE79 360 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 FCAMRQ8WWV6 532 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 DDB2Q92466 427 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 DIRAS2Q96HU8 199 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 ABHD1Q96SE0 405 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 SLIRPQ9GZT3 109 aaKnown RBP10.24□□□□□ -0.77
COMMD4-214ENST00000566230 NXF2Q9GZY0 626 aaKnown RBP10.24□□□□□ -0.77
COMMD4-214ENST00000566230 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 EHFQ9NZC4 300 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 NDUFA13Q9P0J0 144 aa10.24□□□□□ -0.77
COMMD4-214ENST00000566230 RSL24D1Q9UHA3 163 aaKnown RBP10.24□□□□□ -0.77
COMMD4-214ENST00000566230 LINC00473A8K010 186 aa10.23□□□□□ -0.77
COMMD4-214ENST00000566230 FCN1O00602 326 aa10.23□□□□□ -0.77
COMMD4-214ENST00000566230 PMP2P02689 132 aa10.23□□□□□ -0.77
COMMD4-214ENST00000566230 RCVRNP35243 200 aa10.23□□□□□ -0.77
COMMD4-214ENST00000566230 CX3CL1P78423 397 aa10.23□□□□□ -0.77
COMMD4-214ENST00000566230 SSBP1Q04837 148 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms