RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 KIAA1456Q9P272 454 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 ZGRF1Q86YA3 2104 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 PTPRZ1P23471 2315 aaPredicted RBP6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 CFAP47Q6ZTR5 3102 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 TRAV1-1A0A0B4J248 108 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 FAM74A7A6NL05 159 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 C17orf98A8MV24 154 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 RAMP3O60896 148 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 C1QL1O75973 258 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 NXPH3O95157 252 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 HPRT1P00492 218 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 KRASP01116 189 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 IGHV1-46P01743 117 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 LIPFP07098 398 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 RAB7AP51149 207 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 BRWD1-AS2P59051 145 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 TNFAIP6P98066 277 aaPredicted RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 RBPJQ06330 500 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 EDDM3AQ14507 147 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 TBR1Q16650 682 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 IZUMO4Q1ZYL8 232 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 LRRC75BQ2VPJ9 315 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 FAM74A3Q4VXF1 159 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 TMEM14EPQ6UXP3 125 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 H2BFWTQ7Z2G1 175 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF525Q8N782 197 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 RFESDQ8TAC1 157 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 RBMXL1Q96E39 390 aaKnown RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 SLC35B3Q9H1N7 401 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 KCNJ16Q9NPI9 418 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 GNG12Q9UBI6 72 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 NDRG3Q9UGV2 375 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 PSG11Q9UQ72 335 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 ZFHX2Q9C0A1 2572 aaPredicted RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 GVINP1Q7Z2Y8 2422 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 CEP250Q9BV73 2442 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 C9JQL5 133 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 NUPL2O15504 423 aaKnown RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 PPIHO43447 177 aaKnown RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 CD55P08174 381 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 IAPPP10997 89 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 DUTP33316 252 aaKnown RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 G6PCP35575 357 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 KIR2DS2P43631 304 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 GPR12P47775 334 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 HOXA4Q00056 320 aaPredicted RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF816Q0VGE8 651 aaPredicted RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 TEX36Q5VZQ5 186 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 SPSB3Q6PJ21 355 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF808Q8N4W9 903 aaPredicted RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF436-AS1Q8NC38 126 aaPredicted RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNRF1Q8ND25 227 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 PINX1Q96BK5 328 aaKnown RBP6□□□□□ -1.45
HERPUD1-209ENST00000564678 TPPP3Q9BW30 176 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF665Q9H7R5 613 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 LINC00574Q9H8X3 128 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 PRELID3BQ9Y3B1 194 aa6□□□□□ -1.45
HERPUD1-209ENST00000564678 IGHV3-43A0A0B4J1X8 118 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 KBTBD11-OT1A0A1B0GTJ5 212 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 RBFOX3A6NFN3 312 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 LINC00473A8K010 186 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 H3BP45 60 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 S1PR2O95136 353 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 TFF1P04155 84 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 METTL15P1P0C7V9 234 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 IGHV3-43DP0DP04 118 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 IRF2P14316 349 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 PAX6P26367 422 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 CCKARP32238 428 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 NPBWR1P48145 328 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 PPT1P50897 306 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 EDDM3BP56851 147 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 TMEM267Q0VDI3 215 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 Q3ZCU0 254 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 SPANXN5Q5MJ07 72 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 STUMQ69YW2 141 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF788Q6ZQV5 615 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 ASCL2Q99929 193 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 WDR61Q9GZS3 305 aaKnown RBP5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 RBKSQ9H477 322 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 CALYQ9NYX4 217 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 CLN8Q9UBY8 286 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 TIMM9Q9Y5J7 89 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 DSCAMO60469 2012 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 ACACAQ13085 2346 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 MUC6Q6W4X9 2439 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 IGHV3OR15-7A0A075B7D8 119 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 TRGV10A0A0A0MS01 117 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 SERTM2A0A1B0GWG4 89 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 C5orf52A6NGY3 159 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 MARCH11A6NNE9 402 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 DEFB108AA8MXU0 73 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 H7C2Y5 167 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 PROP1O75360 226 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 PLA2G5P39877 138 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 PRRX1P54821 245 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 RUNX1Q01196 453 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 ARL16Q0P5N6 197 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 SCGB2A2Q13296 93 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 SPRNQ5BIV9 151 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms