RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 DGAT2L6Q6ZPD8 337 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 MUC15Q8N387 334 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 BEST4Q8NFU0 473 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 OR51S1Q8NGJ8 323 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 OR4X1Q8NH49 305 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 OR10D3Q8NH80 312 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 PSMF1Q92530 271 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 EBF4Q9BQW3 602 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 CHST5Q9GZS9 411 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 VCXQ9H320 206 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 NANOGQ9H9S0 305 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 ZNF556Q9HAH1 456 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 NMNAT1Q9HAN9 279 aaPredicted RBP3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 SS18L2Q9UHA2 77 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 SPTBN4Q9H254 2564 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 SCN3AQ9NY46 2000 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 SDK2Q58EX2 2172 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 WDFY4Q6ZS81 3184 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 IGLV3-32A0A0A0MS00 114 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 IGHV3OR16-9A0A0B4J2B5 98 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 A0A0J9YXV3 536 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 OR4C46A6NHA9 309 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 MPTX1A8MV57 137 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 H3BP45 60 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 EPPINO95925 133 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ALPLP05186 524 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 MRPL3P09001 348 aaKnown RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 PSMB1P20618 241 aaKnown RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 SLC6A1P30531 599 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ZNF133P52736 654 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 RAB5BP61020 215 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 SELENOWP63302 87 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 KIAA0087Q14695 138 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 QPRTQ15274 297 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 LRRC36Q1X8D7 754 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 LINC00303Q3SY05 128 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 TSPO2Q5TGU0 170 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 RSBN1Q5VWQ0 802 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 OTPQ5XKR4 325 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 GLYATQ6IB77 296 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 SLC35E4Q6ICL7 350 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 RPL13AP3Q6NVV1 102 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ZNF774Q6NX45 483 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ZNF613Q6PF04 617 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 TEX43Q6ZNM6 134 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 NEGR1Q7Z3B1 354 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 OR11H7Q8NGC8 314 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 OR4M1Q8NGD0 313 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 OR10A6Q8NH74 314 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 GRPEL2Q8TAA5 225 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 C10orf82Q8WW14 230 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 GMPPAQ96IJ6 420 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 TTTY12Q9BZ98 90 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 DEFB127Q9H1M4 99 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 BIN3Q9NQY0 253 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 DOK5Q9P104 306 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 CHCHD2Q9Y6H1 151 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 CROCCQ5TZA2 2017 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 KIF26BQ2KJY2 2108 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 TRAV8-2A0A0B4J237 113 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 IGHV3-16A0A0C4DH30 117 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 C4orf51C9J302 202 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 PPP5D1E7EU14 171 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 M0QZK8 103 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 HMGN4O00479 90 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 TCAPO15273 167 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 SLC31A2O15432 143 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 GCM2O75603 506 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 OR7C1O76099 320 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 DUS4LO95620 317 aaKnown RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 IGF2P01344 180 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 SCGB1A1P11684 91 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 S100A7P31151 101 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 OR3A4PP47883 348 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ZNF138P52744 262 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 KLF9Q13886 244 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 LY6DQ14210 128 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ACOT6Q3I5F7 207 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 C9orf66Q5T8R8 295 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 MORN5Q5VZ52 161 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ELP2Q6IA86 826 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ZFP1Q6P2D0 407 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 UGT2A3Q6UWM9 527 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 GSG1LQ6UXU4 331 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 SPNS3Q6ZMD2 512 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ZNF771Q7L3S4 317 aaPredicted RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 TGIF2LYQ8IUE0 185 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 CLECL1Q8IZS7 167 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 TMEM61Q8N0U2 210 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 EIF4E3Q8N5X7 224 aaKnown RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 FAM57AQ8TBR7 257 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 DNAJC9Q8WXX5 260 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 SIGLEC12Q96PQ1 595 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ARHGDIGQ99819 225 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 SEC22CQ9BRL7 303 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 AICDAQ9GZX7 198 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ZDHHC11Q9H8X9 412 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ISG20L2Q9H9L3 353 aaKnown RBP3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 GNB4Q9HAV0 340 aa3.95□□□□□ -1.78
VPS35P1-201ENST00000563400 ACER3Q9NUN7 267 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms