RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ZNF430Q9H8G1 570 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-202ENST00000562722 SRD5A3Q9H8P0 318 aa9.83□□□□□ -0.84
SF3B3-202ENST00000562722 PLECQ15149 4684 aaKnown RBP9.82□□□□□ -0.84
SF3B3-202ENST00000562722 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.82□□□□□ -0.84
SF3B3-202ENST00000562722 DPPA5A6NC42 116 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 LINC00473A8K010 186 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 PPP5D1E7EU14 171 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 PDCD5O14737 125 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 OR2J3O76001 311 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 CD7P09564 240 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 SAA1P0DJI8 122 aaPredicted RBP9.82□□□□□ -0.84
SF3B3-202ENST00000562722 HIST1H1DP16402 221 aaKnown RBP9.82□□□□□ -0.84
SF3B3-202ENST00000562722 CDK10Q15131 360 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 C15orf32Q32M92 178 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 OR2B11Q5JQS5 317 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 C10orf55Q5SWW7 151 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 MMD2Q8IY49 270 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 H1FOOQ8IZA3 346 aaPredicted RBP9.82□□□□□ -0.84
SF3B3-202ENST00000562722 NECAP1Q8NC96 275 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 DDB2Q92466 427 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 KCTD12Q96CX2 325 aaKnown RBP9.82□□□□□ -0.84
SF3B3-202ENST00000562722 CENPOQ9BU64 300 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 WFDC10AQ9H1F0 79 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 ACOT13Q9NPJ3 140 aa9.82□□□□□ -0.84
SF3B3-202ENST00000562722 TRBV9A0A0B4J1U6 114 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 METTL21EPA6NDL7 271 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 OR11H12B2RN74 326 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 MFNGO00587 321 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 FCGR3BO75015 233 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 HLA-AP01891 365 aaKnown RBP9.81□□□□□ -0.84
SF3B3-202ENST00000562722 FOLR2P14207 255 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 MECP2P51608 486 aaKnown RBP9.81□□□□□ -0.84
SF3B3-202ENST00000562722 OR10A3P58181 314 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 FAM209BQ5JX69 171 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 KCTD9Q7L273 389 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 SLC25A42Q86VD7 318 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 TTC9CQ8N5M4 171 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 MGLLQ99685 303 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 NKX1-2Q9UD57 310 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-202ENST00000562722 MRPS7Q9Y2R9 242 aaKnown RBP9.81□□□□□ -0.84
SF3B3-202ENST00000562722 PRELID3BQ9Y3B1 194 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 SELENOKQ9Y6D0 94 aa9.81□□□□□ -0.84
SF3B3-202ENST00000562722 TNCP24821 2201 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 RBMY1BA6NDE4 496 aaKnown RBP9.8□□□□□ -0.84
SF3B3-202ENST00000562722 RBMY1EA6NEQ0 496 aaKnown RBP9.8□□□□□ -0.84
SF3B3-202ENST00000562722 HMX3A6NHT5 357 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 C2orf70A6NJV1 201 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 ZNF785A8K8V0 405 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 GGCTO75223 188 aaKnown RBP9.8□□□□□ -0.84
SF3B3-202ENST00000562722 OR2C1O95371 312 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 RBMY1DP0C7P1 496 aaKnown RBP9.8□□□□□ -0.84
SF3B3-202ENST00000562722 CD36P16671 472 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 EDN2P20800 178 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 MYL9P24844 172 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 MAP2K4P45985 399 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 DEFB114Q30KQ6 69 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 LINC00322Q6ZN03 302 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-202ENST00000562722 SLC16A13Q7RTY0 426 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 VKORC1L1Q8N0U8 176 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 ZNF645Q8N7E2 425 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 WDR89Q96FK6 387 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-202ENST00000562722 FYTTD1Q96QD9 318 aaKnown RBP9.8□□□□□ -0.84
SF3B3-202ENST00000562722 ATG5Q9H1Y0 275 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 TECRQ9NZ01 308 aaKnown RBP9.8□□□□□ -0.84
SF3B3-202ENST00000562722 FBXL7Q9UJT9 491 aa9.8□□□□□ -0.84
SF3B3-202ENST00000562722 IGKV1D-8A0A087WSZ0 117 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 ZNF320A2RRD8 509 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 IFITM5A6NNB3 132 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 RAB27BO00194 218 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 IGHV3-23P01764 117 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 RAB6AP20340 208 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 KIR2DS2P43631 304 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 AQP4P55087 323 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 C19orf35Q6ZS72 473 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 TCTEX1D2Q8WW35 142 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 ST6GALNAC5Q9BVH7 336 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 DUSP21Q9H596 190 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 ZNF257Q9Y2Q1 563 aa9.79□□□□□ -0.84
SF3B3-202ENST00000562722 NFYAP23511 347 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-202ENST00000562722 DTYMKP23919 212 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 CRHBPP24387 322 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 ARL3P36405 182 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 RPL27AP46776 148 aaKnown RBP9.78□□□□□ -0.84
SF3B3-202ENST00000562722 ARL6IP1Q15041 203 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 PRSS48Q7RTY5 328 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 OR4S2Q8NH73 311 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 VSTM2AQ8TAG5 236 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 CACNG8Q8WXS5 425 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 OR2A7Q96R45 310 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 OR51E2Q9H255 320 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 ELF5Q9UKW6 265 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-202ENST00000562722 RBMX2Q9Y388 322 aaKnown RBP9.78□□□□□ -0.84
SF3B3-202ENST00000562722 OR2W1Q9Y3N9 320 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 S4R3C0 116 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 ALMS1Q8TCU4 4167 aa9.78□□□□□ -0.84
SF3B3-202ENST00000562722 TRAV1-2A0A0B4J238 106 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 TEX22C9J3V5 150 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 SLC22A5O76082 557 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 KBTBD11O94819 623 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 DHFRP00374 187 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms