RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ZNF430Q9H8G1 570 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 PLEKHA3Q9HB20 300 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 PEMTQ9UBM1 199 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 PDCD5O14737 125 aa12.63□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 ARFRP1Q13795 201 aa12.63□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 CDK10Q15131 360 aa12.63□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 CD300EQ496F6 205 aaPredicted RBP12.63□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 NR2C2APQ86WQ0 139 aa12.63□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 OR2K2Q8NGT1 345 aa12.63□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 J3QRK9 145 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 AIREO43918 545 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 IFNA6P05013 189 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 EDN2P20800 178 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 CD81P60033 236 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 ATP5G2Q06055 141 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TBCEQ15813 527 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TTC9CQ8N5M4 171 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 ZNF645Q8N7E2 425 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 FAM110AQ9BQ89 295 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 HIPK2Q9H2X6 1198 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 DMRT1Q9Y5R6 373 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 CEPT1Q9Y6K0 416 aa12.62□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 ZNF785A8K8V0 405 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 PPP5D1E7EU14 171 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 FCGR3BO75015 233 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 IGLV2-14P01704 120 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 CD7P09564 240 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 RAB3BP20337 219 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TALDO1P37837 337 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 RPL30P62888 115 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 OR2B11Q5JQS5 317 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 C19orf35Q6ZS72 473 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 KCTD9Q7L273 389 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 ZNF367Q7RTV3 350 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 MMD2Q8IY49 270 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 NECAP1Q8NC96 275 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 SPIN2AQ99865 258 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 SPIN2BQ9BPZ2 258 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 NEURL2Q9BR09 285 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 WFDC10AQ9H1F0 79 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 NDUFB11Q9NX14 153 aa12.61□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 METTL21EPA6NDL7 271 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TEX22C9J3V5 150 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 CREBL2O60519 120 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TUSC2O75896 110 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 OR2J3O76001 311 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 NFYAP23511 347 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 DTYMKP23919 212 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 MYL9P24844 172 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 C15orf32Q32M92 178 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 LAX1Q8IWV1 398 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 VKORC1L1Q8N0U8 176 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 DCUN1D5Q9BTE7 237 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 CENPOQ9BU64 300 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 ATG5Q9H1Y0 275 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TNCP24821 2201 aa12.6□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 IGKV1D-13A0A0B4J2D9 117 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TRDV1A0A1B0GX56 115 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 SMIM30A4D0T7 59 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 RBMY1BA6NDE4 496 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 RBMY1EA6NEQ0 496 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 HMX3A6NHT5 357 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 E7EUB6 86 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 ACTL6BO94805 426 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TPPPO94811 219 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 HLA-DQB1P01920 261 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 RBMY1DP0C7P1 496 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 IGKV1-13P0DP09 117 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 DEFB114Q30KQ6 69 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 CDNFQ49AH0 187 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 DEFB125Q8N687 156 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 KCTD12Q96CX2 325 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 ST6GALNAC5Q9BVH7 336 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 RBMX2Q9Y388 322 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 OR2W1Q9Y3N9 320 aa12.59□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 A0A1B0GW64 132 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 C2orf70A6NJV1 201 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 FOLR2P14207 255 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 BRWD1-AS2P59051 145 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 EIF4EBP1Q13541 118 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 HACD4Q5VWC8 232 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 C22orf42Q6IC83 251 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 DYNLRB2Q8TF09 96 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 OR51E2Q9H255 320 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 ZC4H2Q9NQZ6 224 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 SLC2A8Q9NY64 477 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 ZNF257Q9Y2Q1 563 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 PRELID3BQ9Y3B1 194 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 ALMS1Q8TCU4 4167 aa12.58□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 ERICH4A6NGS2 130 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 KBTBD11O94819 623 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 IL6RP08887 468 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CD36P16671 472 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 KIR2DS2P43631 304 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 ARL6IP1Q15041 203 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 SLC25A42Q86VD7 318 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 NUDCD2Q8WVJ2 157 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms