RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 MBD3L1Q8WWY6 194 aa9.2□□□□□ -0.94
NEIL1-202ENST00000561643 RBKSQ9H477 322 aa9.2□□□□□ -0.94
NEIL1-202ENST00000561643 PAM16Q9Y3D7 125 aa9.2□□□□□ -0.94
NEIL1-202ENST00000561643 OTOGLQ3ZCN5 2332 aa9.2□□□□□ -0.94
NEIL1-202ENST00000561643 MAP1LC3B2A6NCE7 125 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 CEBPZOSA8MTT3 80 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 FAM90A26D6RGX4 464 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 AGFG2O95081 481 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 OR10J1P30954 320 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 GABRA2P47869 451 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 FAM53AQ6NSI3 398 aaPredicted RBP9.19□□□□□ -0.94
NEIL1-202ENST00000561643 INO80CQ6PI98 192 aaPredicted RBP9.19□□□□□ -0.94
NEIL1-202ENST00000561643 TOMM20LQ6UXN7 152 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 TMEM170AQ8WVE7 144 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 TAF15Q92804 592 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEIL1-202ENST00000561643 PINX1Q96BK5 328 aaKnown RBP9.19□□□□□ -0.94
NEIL1-202ENST00000561643 ACY3Q96HD9 319 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 MS4A10Q96PG2 267 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 MAP1LC3BQ9GZQ8 125 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 CACNA1DQ01668 2161 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 GTF3C1Q12789 2109 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 HBZP02008 142 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 GALR1P47211 349 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 PDLIM4P50479 330 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 SOX8P57073 446 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 CATR1Q13166 79 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 FAM214BQ7L5A3 538 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 TMEM256Q8N2U0 113 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 GBGT1Q8N5D6 347 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 MRGPRDQ8TDS7 321 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 LOXL4Q96JB6 756 aa9.19□□□□□ -0.94
NEIL1-202ENST00000561643 OOEPA6NGQ2 149 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 ITGB1BP1O14713 200 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 MLNRO43193 412 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 NUPR1O60356 82 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 RBMXL2O75526 392 aaKnown RBP9.18□□□□□ -0.94
NEIL1-202ENST00000561643 IFNA1P01562 189 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 TFF1P04155 84 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 RAB7AP51149 207 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 RPL30P62888 115 aaKnown RBP9.18□□□□□ -0.94
NEIL1-202ENST00000561643 LYG1Q8N1E2 194 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 ZBTB34Q8NCN2 500 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 SLC39A9Q9NUM3 307 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 FZR1Q9UM11 496 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 CHTOPQ9Y3Y2 248 aaKnown RBP9.18□□□□□ -0.94
NEIL1-202ENST00000561643 TIMM8AO60220 97 aaPredicted RBP9.18□□□□□ -0.94
NEIL1-202ENST00000561643 CHRNB4P30926 498 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 CDKN1BP46527 198 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 PRAMEF6Q5VXH4 476 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 Q6ZT83 130 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 LHX4Q969G2 390 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 OR5B12Q96R08 314 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 CLCF1Q9UBD9 225 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 CLN8Q9UBY8 286 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 H7BYZ3 331 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 GALR2O43603 387 aaPredicted RBP9.18□□□□□ -0.94
NEIL1-202ENST00000561643 S1PR2O95136 353 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 SLC35E4Q6ICL7 350 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 TMEM14EPQ6UXP3 125 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 MRGPRGQ86SM5 289 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 TPRX1Q8N7U7 411 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 OR51G1Q8NGK1 321 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 NUDT11Q96G61 164 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 CTDSP1Q9GZU7 261 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 HES4Q9HCC6 221 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 SELENOKQ9Y6D0 94 aa9.18□□□□□ -0.94
NEIL1-202ENST00000561643 PRRC2CQ9Y520 2896 aaKnown RBP9.17□□□□□ -0.94
NEIL1-202ENST00000561643 ODAMA1E959 279 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 CCL11P51671 97 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 C5orf30Q96GV9 206 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 SMIM7Q9BQ49 75 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 MIEN1Q9BRT3 115 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
NEIL1-202ENST00000561643 CXXC4Q9H2H0 198 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.17□□□□□ -0.94
NEIL1-202ENST00000561643 HSPB7Q9UBY9 170 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 C17orf98A8MV24 154 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 HMGB3O15347 200 aaKnown RBP9.17□□□□□ -0.94
NEIL1-202ENST00000561643 ZNF737O75373 536 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 FABP6P51161 128 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 RPS16P62249 146 aaKnown RBP9.17□□□□□ -0.94
NEIL1-202ENST00000561643 ACP7Q6ZNF0 438 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 WFDC8Q8IUA0 241 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 RPUSD4Q96CM3 377 aaKnown RBP9.17□□□□□ -0.94
NEIL1-202ENST00000561643 COQ2Q96H96 371 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 P2RX4Q99571 388 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 ZFP30Q9Y2G7 519 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 USF3Q68DE3 2245 aa9.17□□□□□ -0.94
NEIL1-202ENST00000561643 IGHV3-43A0A0B4J1X8 118 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 TRAV34A0A0B4J273 112 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 LRRC30A6NM36 301 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 IGHV3-43DP0DP04 118 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 PLA2G5P39877 138 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 ACSF3Q4G176 576 aaPredicted RBP9.16□□□□□ -0.94
NEIL1-202ENST00000561643 C11orf53Q8IXP5 236 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 OR5T1Q8NG75 326 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 RFESDQ8TAC1 157 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 PYGO2Q9BRQ0 406 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 SSTR5P35346 364 aa9.16□□□□□ -0.94
NEIL1-202ENST00000561643 CNN1P51911 297 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms