RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 LINC00205P59089 165 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 GNB2P62879 340 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 ZNF816Q0VGE8 651 aaPredicted RBP6.12□□□□□ -1.43
TPM1-231ENST00000561395 PDLIM3Q53GG5 364 aaPredicted RBP6.12□□□□□ -1.43
TPM1-231ENST00000561395 CYB5R2Q6BCY4 276 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 FAM71F2Q6NXP2 309 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 ZNF833PQ6ZTB9 187 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 ZNF767PQ75MW2 155 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 FOXRED2Q8IWF2 684 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 ZNF525Q8N782 197 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 ADTRPQ96IZ2 230 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 RHOVQ96L33 236 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 AQP10Q96PS8 301 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 S1PR3Q99500 378 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 SSBP3Q9BWW4 388 aaPredicted RBP6.12□□□□□ -1.43
TPM1-231ENST00000561395 C11orf1Q9H5F2 150 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 NARFLQ9H6Q4 476 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 ZNRD1Q9P1U0 126 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 CACNG5Q9UF02 275 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 NSG2Q9Y328 171 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 PRELID3BQ9Y3B1 194 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 MMP24Q9Y5R2 645 aa6.12□□□□□ -1.43
TPM1-231ENST00000561395 LOC105371242A0A075B767 164 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 MSGN1A6NI15 193 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 MARCH11A6NNE9 402 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 J3QR06 171 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 M0R1W7 72 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 FCGR3BO75015 233 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 HPRT1P00492 218 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 G6PCP35575 357 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 ZNF137PP52743 207 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 POLR2GP62487 172 aaKnown RBP eCLIP6.11□□□□□ -1.43
TPM1-231ENST00000561395 ID3Q02535 119 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 IZUMO4Q1ZYL8 232 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 CXorf66Q5JRM2 361 aaPredicted RBP6.11□□□□□ -1.43
TPM1-231ENST00000561395 TEX261Q6UWH6 196 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 C12orf54Q6X4T0 127 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 Q6ZRM9 215 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 SLC51BQ86UW2 128 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 TEX29Q8N6K0 151 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 ZNF383Q8NA42 475 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 DMBX1Q8NFW5 382 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 OR8H1Q8NGG4 311 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 OR10X1Q8NGY0 326 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 OR4S2Q8NH73 311 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 OR9G1Q8NH87 305 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 TNFRSF14Q92956 283 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 MRPL20Q9BYC9 149 aaKnown RBP6.11□□□□□ -1.43
TPM1-231ENST00000561395 BPESC1Q9GZL8 116 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 PLEKHA2Q9HB19 425 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 COA4Q9NYJ1 87 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 ONECUT1Q9UBC0 465 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 PAIP2BQ9ULR5 123 aaKnown RBP6.11□□□□□ -1.43
TPM1-231ENST00000561395 U3KQ87 197 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 NOTCH1P46531 2555 aa6.11□□□□□ -1.43
TPM1-231ENST00000561395 IGHV2-26A0A0B4J1V2 119 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 hCG_1809904A0A1W2PP81 198 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 A0A1W2PPE2 198 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 KANTRA0A1W2PQU2 76 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 A0A1W2PR64 198 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 A0A1W2PRV1 198 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 FAM90A9PA6NNJ1 464 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 A8MXK9 166 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 FAM90A26D6RGX4 464 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 SSSCA1O60232 199 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 CFDP00746 253 aaPredicted RBP6.1□□□□□ -1.43
TPM1-231ENST00000561395 KRASP01116 189 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 CT45A6P0DMU7 189 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 CT45A5P0DMU8 189 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 CT45A7P0DMV0 189 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 HKR1P10072 659 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 MMP9P14780 707 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 NQO2P16083 231 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 PVALBP20472 110 aaPredicted RBP6.1□□□□□ -1.43
TPM1-231ENST00000561395 IL3RAP26951 378 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 RPL12P30050 165 aaKnown RBP6.1□□□□□ -1.43
TPM1-231ENST00000561395 P2RY1P47900 373 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 LMO4P61968 165 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 UBA52P62987 128 aaKnown RBP6.1□□□□□ -1.43
TPM1-231ENST00000561395 TMEM249Q2WGJ8 235 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 MIDNQ504T8 468 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 IL17RELQ6ZVW7 336 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 ABHD12Q8N2K0 398 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 KIR3DL3Q8N743 410 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 Q8N7P7 452 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 ZNF680Q8NEM1 530 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 CLDND2Q8NHS1 167 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 ST6GALNAC6Q969X2 333 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 R3HDM4Q96D70 268 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 PIMREGQ9BSJ6 248 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 CLEC7AQ9BXN2 247 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 MAGT1Q9H0U3 335 aa6.1□□□□□ -1.43
TPM1-231ENST00000561395 TRRAPQ9Y4A5 3859 aa6.09□□□□□ -1.43
TPM1-231ENST00000561395 TMEM238LA0A1B0GVL6 79 aa6.09□□□□□ -1.43
TPM1-231ENST00000561395 VWC2LB2RUY7 222 aa6.09□□□□□ -1.43
TPM1-231ENST00000561395 H0YJW9 148 aa6.09□□□□□ -1.43
TPM1-231ENST00000561395 NDUFS8O00217 210 aa6.09□□□□□ -1.43
TPM1-231ENST00000561395 WRBO00258 174 aa6.09□□□□□ -1.43
TPM1-231ENST00000561395 TOR1AO14656 332 aa6.09□□□□□ -1.43
TPM1-231ENST00000561395 ENSAO43768 121 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms