RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 CXCL3P19876 107 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ZBTB25P24278 435 aa2.55□□□□□ -2
SPG11-225ENST00000561391 PSMB6P28072 239 aa2.55□□□□□ -2
SPG11-225ENST00000561391 CD34P28906 385 aa2.55□□□□□ -2
SPG11-225ENST00000561391 CALCRP30988 508 aa2.55□□□□□ -2
SPG11-225ENST00000561391 S100A11P31949 105 aa2.55□□□□□ -2
SPG11-225ENST00000561391 HRH1P35367 487 aa2.55□□□□□ -2
SPG11-225ENST00000561391 NUP214P35658 2090 aaPredicted RBP2.55□□□□□ -2
SPG11-225ENST00000561391 GLP1RP43220 463 aa2.55□□□□□ -2
SPG11-225ENST00000561391 KIR2DS4P43632 304 aa2.55□□□□□ -2
SPG11-225ENST00000561391 OR3A4PP47883 348 aa2.55□□□□□ -2
SPG11-225ENST00000561391 HOXA1P49639 335 aaPredicted RBP2.55□□□□□ -2
SPG11-225ENST00000561391 SNU13P55769 128 aaKnown RBP2.55□□□□□ -2
SPG11-225ENST00000561391 TMEM50BP56557 158 aa2.55□□□□□ -2
SPG11-225ENST00000561391 GNG3P63215 75 aa2.55□□□□□ -2
SPG11-225ENST00000561391 IFITM2Q01629 132 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ZNF92Q03936 586 aa2.55□□□□□ -2
SPG11-225ENST00000561391 GAGE2BQ13066 116 aa2.55□□□□□ -2
SPG11-225ENST00000561391 PDZK1IP1Q13113 114 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ZNF345Q14585 488 aa2.55□□□□□ -2
SPG11-225ENST00000561391 KIR2DS1Q14954 304 aa2.55□□□□□ -2
SPG11-225ENST00000561391 OPCMLQ14982 345 aa2.55□□□□□ -2
SPG11-225ENST00000561391 UBE2V2Q15819 145 aa2.55□□□□□ -2
SPG11-225ENST00000561391 TBC1D28Q2M2D7 210 aa2.55□□□□□ -2
SPG11-225ENST00000561391 MPV17LQ2QL34 196 aa2.55□□□□□ -2
SPG11-225ENST00000561391 SNAI3Q3KNW1 292 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ALKBH6Q3KRA9 238 aa2.55□□□□□ -2
SPG11-225ENST00000561391 GAGE2EQ4V326 116 aa2.55□□□□□ -2
SPG11-225ENST00000561391 CLLU1Q5K131 121 aa2.55□□□□□ -2
SPG11-225ENST00000561391 OTPQ5XKR4 325 aa2.55□□□□□ -2
SPG11-225ENST00000561391 PLCXD3Q63HM9 321 aa2.55□□□□□ -2
SPG11-225ENST00000561391 LAMTOR1Q6IAA8 161 aa2.55□□□□□ -2
SPG11-225ENST00000561391 OR10K2Q6IF99 312 aa2.55□□□□□ -2
SPG11-225ENST00000561391 GAGE2AQ6NT46 116 aa2.55□□□□□ -2
SPG11-225ENST00000561391 GSG1LQ6UXU4 331 aa2.55□□□□□ -2
SPG11-225ENST00000561391 Q6ZS49 121 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ACOT7LQ6ZUV0 252 aa2.55□□□□□ -2
SPG11-225ENST00000561391 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
SPG11-225ENST00000561391 KCTD9Q7L273 389 aa2.55□□□□□ -2
SPG11-225ENST00000561391 TMED4Q7Z7H5 227 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ZNF546Q86UE3 836 aa2.55□□□□□ -2
SPG11-225ENST00000561391 SLC51BQ86UW2 128 aa2.55□□□□□ -2
SPG11-225ENST00000561391 SGPP2Q8IWX5 399 aa2.55□□□□□ -2
SPG11-225ENST00000561391 OSR2Q8N2R0 312 aa2.55□□□□□ -2
SPG11-225ENST00000561391 C17orf78Q8N4C9 275 aa2.55□□□□□ -2
SPG11-225ENST00000561391 KLHDC1Q8N7A1 406 aa2.55□□□□□ -2
SPG11-225ENST00000561391 CCDC71LQ8N9Z2 235 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ZNF680Q8NEM1 530 aa2.55□□□□□ -2
SPG11-225ENST00000561391 SLC24A4Q8NFF2 622 aa2.55□□□□□ -2
SPG11-225ENST00000561391 SSMEM1Q8WWF3 244 aa2.55□□□□□ -2
SPG11-225ENST00000561391 PIGCQ92535 297 aa2.55□□□□□ -2
SPG11-225ENST00000561391 BCL2L2Q92843 193 aaPredicted RBP2.55□□□□□ -2
SPG11-225ENST00000561391 PHYHIPLQ96FC7 376 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ARHGAP5-AS1Q96IT6 56 aa2.55□□□□□ -2
SPG11-225ENST00000561391 CITED2Q99967 270 aaPredicted RBP2.55□□□□□ -2
SPG11-225ENST00000561391 MICU1Q9BPX6 476 aa2.55□□□□□ -2
SPG11-225ENST00000561391 PDCD10Q9BUL8 212 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ST6GALNAC5Q9BVH7 336 aa2.55□□□□□ -2
SPG11-225ENST00000561391 NMES1Q9C002 83 aa2.55□□□□□ -2
SPG11-225ENST00000561391 PKIBQ9C010 78 aa2.55□□□□□ -2
SPG11-225ENST00000561391 WNT5BQ9H1J7 359 aa2.55□□□□□ -2
SPG11-225ENST00000561391 C12orf4Q9NQ89 552 aa2.55□□□□□ -2
SPG11-225ENST00000561391 MED9Q9NWA0 146 aa2.55□□□□□ -2
SPG11-225ENST00000561391 C1orf123Q9NWV4 160 aa2.55□□□□□ -2
SPG11-225ENST00000561391 GAGE2DQ9UEU5 116 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ELF5Q9UKW6 265 aaPredicted RBP2.55□□□□□ -2
SPG11-225ENST00000561391 GPR132Q9UNW8 380 aa2.55□□□□□ -2
SPG11-225ENST00000561391 FLVCR2Q9UPI3 526 aa2.55□□□□□ -2
SPG11-225ENST00000561391 POLDIP2Q9Y2S7 368 aa2.55□□□□□ -2
SPG11-225ENST00000561391 KCNK7Q9Y2U2 307 aa2.55□□□□□ -2
SPG11-225ENST00000561391 WIPI2Q9Y4P8 454 aa2.55□□□□□ -2
SPG11-225ENST00000561391 POMT1Q9Y6A1 747 aa2.55□□□□□ -2
SPG11-225ENST00000561391 ALMS1Q8TCU4 4167 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PPIAL4EA0A075B759 164 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PPIAL4CA0A0B4J2A2 164 aa2.54□□□□□ -2
SPG11-225ENST00000561391 IGHV1-18A0A0C4DH31 117 aa2.54□□□□□ -2
SPG11-225ENST00000561391 hCG_38984A0A1B0GV85 526 aa2.54□□□□□ -2
SPG11-225ENST00000561391 KANTRA0A1W2PQU2 76 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PQLC2LA1A4F0 135 aa2.54□□□□□ -2
SPG11-225ENST00000561391 LINC00862A6NCI5 91 aa2.54□□□□□ -2
SPG11-225ENST00000561391 C5orf51A6NDU8 294 aa2.54□□□□□ -2
SPG11-225ENST00000561391 TMEM210A6NLX4 147 aa2.54□□□□□ -2
SPG11-225ENST00000561391 CD300LBA8K4G0 201 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ZNF850A8MQ14 1090 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PPIAL4DF5H284 164 aa2.54□□□□□ -2
SPG11-225ENST00000561391 GOSR2O14653 212 aa2.54□□□□□ -2
SPG11-225ENST00000561391 SSX5O60225 188 aa2.54□□□□□ -2
SPG11-225ENST00000561391 DEDDO75618 318 aa2.54□□□□□ -2
SPG11-225ENST00000561391 RP2O75695 350 aa2.54□□□□□ -2
SPG11-225ENST00000561391 SFT2D2O95562 160 aa2.54□□□□□ -2
SPG11-225ENST00000561391 HLA-HP01893 362 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PMP2P02689 132 aa2.54□□□□□ -2
SPG11-225ENST00000561391 RBMY1CP0DJD4 496 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ZNF728P0DKX0 622 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PPIAL4FP0DN26 164 aa2.54□□□□□ -2
SPG11-225ENST00000561391 OR5H8P0DN80 308 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PTHLHP12272 177 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ZNF35P13682 527 aa2.54□□□□□ -2
SPG11-225ENST00000561391 CBR1P16152 277 aa2.54□□□□□ -2
SPG11-225ENST00000561391 AKR1C4P17516 323 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms